Spatial-Heterogeneity forecasting

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Manually curated articles on Spatial-Heterogeneity forecasting

Abstract Title Authors Publication Date Journal/ Conference Citation count Highest h-index View recommendations
visibility_off Spatial epitope barcoding reveals subclonal tumor patch behaviors Xavier Rovira-Clavé, Alexandros P. Drainas, Sizun Jiang, Yunhao Bai, M. Baron, Bokai Zhu, Maxim Markovic, Garry L. Coles, M. Bassik, J. Sage, G. Nolan 2021-06-11 bioRxiv 12 102 open_in_new
Abstract Title Authors Publication Date Journal/ Conference Citation count Highest h-index View recommendations

Abstract Title Authors Publication Date Journal/Conference Citation count Highest h-index
visibility_off An image analysis pipeline to quantify the spatial distribution of cell markers in stroma-rich tumors Antoine A. Ruzette, Nina Kozlova, Kayla A. Cruz, Taru Muranen, S. Nørrelykke 2025-09-05 Frontiers in Bioinformatics 0 8
visibility_off Contrastive learning uncovers cellular interactions and morphologies in the tumor microenvironment of lung adenocarcinoma linked to immunotherapy response H. Le, N. Coudray, A. Yeaton, Sitharam Ramaswami, A. Karimkhan, , James Cai, Tai-Hsien Ou Yang, S. Punekar, Luis Chiriboga, Vamsidhar Velcheti, Kwok-Kin Wong, D. Sterman, Andre L. Moreira, Harvey I. Pass, A. Tsirigos 2025-10-02 Scientific Reports 0 70
visibility_off Single-cell multi-omics in cancer immunotherapy: from tumor heterogeneity to personalized precision treatment Jiayuan Le, Yating Dian, Deze Zhao, Ziyu Guo, Zehao Luo, Xiang Chen, Furong Zeng, Guangtong Deng 2025-08-25 Molecular Cancer 1 15
visibility_off Deciphering Cell Fate and Clonal Dynamics via Integrative Single-Cell Lineage Modeling Yuntian Fu, D. Mathew, Mingshuang Wang, Xinyi E. Chen, Kevin Z Lin, Dylan Schaff, Sydney M Shaffer, Drew M Pardoll, Christina Jackson, Nancy R Zhang 2025-09-04 bioRxiv 0 33
visibility_off Deciphering Cell Fate and Clonal Dynamics via Integrative Single-Cell Lineage Modeling Nancy R Zhang, Yuntian Fu, D. Mathew, Mingshuang Wang, Xinyi E. Chen, Kevin Z Lin, Dylan Schaff, Sydney M Shaffer, Drew Pardoll, Christina Jackson 2025-09-24 Research Square 0 33
visibility_off Abstract B123: Phenotypic, Microenvironmental, and Genetic Crosstalk Shapes Pancreatic Cancer Organization O. Elhanani, Guy Truzman, Martin Wartenberg, Yuval Bussi, Dana Shainshein, Bar Engelberg, Ido Harlev, Adi Lilien, I. Zlobec, Tamar Geiger, Leeat Keren 2025-09-28 Cancer Research 0 24
visibility_off Patient-Derived Tumor Organoids to Model Cancer Cell Plasticity and Overcome Therapeutic Resistance R. Coppo, Masahiro Inoue 2025-09-01 Cells 0 7
visibility_off ID8 cells manifest phenotypic plasticity and molecular heterogeneity of high-grade serous ovarian cancer in response to the local tissue niche Ritika Gupta, S. Shravan, Swapna Balaji Agwane, R. M. Bankar, S. Bapat 2025-10-03 Scientific Reports 0 20
visibility_off Clonal dynamics shaped by diverse drug-tolerant persister states in melanoma resistance Haiyin Li, Yeqing Chen, Jessica Kaster, Maggie Dunne, Min Xiao, Ling Li, Monzy Thomas, Nazifa Promi, Dylan Fingerman, G. Brown, Qiuxian Zheng, Xingyue Zhu, McKenna Reale, Andrew Patterson, Le Gao, Xuxiang Zhang, Siqi Jiang, Tianxing Hu, Hanzhang Fang, Jianlan Ren, Cong Qi, Luyang Wang, Haiwei Mou, Gatha Thacker, Eric Ramirez Salazar, J. Villanueva, Arjun Raj, Dave SB Hoon, Tian Bin, Jozef Madzo, Zhi Wei, Noam Auslander, M. Herlyn 2025-09-19 bioRxiv 0 117
visibility_off Current Role and Future Frontiers of Spatial Transcriptomics in Genitourinary Cancers Firas Hatoum, Adnan Fazili, Justin W Miller, Xuefeng Wang, Xiaoqing Yu, Xin Lu, Jeffrey S. Johnson, Philippe E. Spiess, J. Chahoud 2025-08-26 Cancers 0 22
visibility_off KS03.6.A THE RECURRENT TISSUE STATES ACROSS ADULT GLIOMAS AS REVEALED BY SPATIAL TRANSCRIPTOMICS A. Mathioudaki, Z. Seferbekova, M. Ritter, D. Calafato, G. Rukhovich, F. Hinz, F. Ippen, E. Popova, N. Koeberer, P. Sant, S. Schinkewitsch, J. Malm, S. Dietrich, C. Herold-Mende, N. Etminan, A. Wick, S. Krieg, M. Platten, A. von Deimling, F. Sahm, A. Suwala, M. Gerstung 2025-10-01 Neuro-Oncology 0 82
visibility_off Temporal Clonal Tracing and Functional Perturbation Reveal Niche-Adaptive and Tumor-Intrinsic IFNγ Dependencies Driving Ovarian Cancer Metastasis Emilija Aleksandrovic, Shaneann Fross, Samantha M. Golomb, Xiyu Liu, Zhuo Zhao, Nikitha M. Das, T. Reese, Wei Ma, Jacqueline Lopez, M. S. Stack, Min Zhao, Siyuan Zhang 2025-08-17 bioRxiv 0 5
visibility_off LEVERAGING ORGANOID TECHNOLOGIES TO CHARACTERIZE DYNAMIC TUMOR CELL STATES DRIVING TREATMENT RESISTANCE IN PANCREATIC CANCER 2025-08-21 European Journal of Histochemistry 0 0
visibility_off Imaging mass cytometry dataset of small-cell lung cancer tumors and tumor microenvironments France Rose, O. Ibruli, Luca Lichius, M. Kiljan, Gokcen Gozum, Manoela Iannicelli Caiaffa, Jiali Cai, Li‐na Niu, Jan M. Herter, Holger Grüll, Reinhard Büttner, F. Beleggia, Graziella Bosco, Julie George, G. Herter-Sprie, H. C. Reinhardt, Katarzyna Bożek 2025-09-08 BMC Research Notes 0 22
visibility_off Spatially resolved endothelial signaling via nampt-itga5 drives immune evasion in stem-like gastric cancer Ji-Yong Sung, Jae-Ho Cheong, Eui Tae Kim 2025-09-29 Cancer Immunology, Immunotherapy : CII 0 9
visibility_off Spatiotemporal microenvironment landscape and malignant epithelial pattern transition in breast ductal carcinoma progression Xifu Cheng, Wenjuan Zeng, Bingzhe Yin, Jiawei Gui, Hengbin Zhang, Zhenxing Lv, Simin Zhang, Yao Zhou 2025-09-24 Journal of Translational Medicine 0 2
visibility_off Tertiary lymphoid structures in Merkel cell carcinoma facilitate naïve and central memory T-cell infiltration linked to immunotherapy response Nalini Srinivas, Ivelina Spassova, Kuan Cheok Lei, Jiwei Gao, María José Pino, Giovanni Giglio, S. Kitanovski, Mazdak Dalkoohi, E. Livingstone, Ulrike Leiter, Peter Mohr, T. Gambichler, Ingo Stoffels, Selma Ugurel, Phyllis Fung-Yi Cheung, Camilla Engblom, Weng-Onn Lui, Jürgen C. Becker 2025-09-01 Journal for Immunotherapy of Cancer 0 11
visibility_off P13.17.B HUMAN MENINGIOMA TUMOR MODELS REVEAL GRADE-SPECIFIC MICROENVIRONMENTAL INTERACTIONS A O Mohammed, K. Joseph, D. Depro, G. Nishita, V. Jariwala, A. Boecke, M. Al Shhab, I. Vasilikos, J. M. Nakagawa, T. Juratli, R. Roelz, M Shah, J. Beck, J. Grauvogel, V. Ravi 2025-10-01 Neuro-Oncology 0 4
visibility_off Leveraging selection for function in tumor evolution: System-level cancer therapies F. Thomas, Jean-Pascal Capp, A. Dujon, A. Marusyk, K. Asselin, M. Campone, Pascal Pujol, Catherine Alix-Panabières, Benjamin Roche, B. Újvári, Robert Gatenby, A. Nedelcu 2025-08-18 Evolution, Medicine, and Public Health 0 29
visibility_off Glycolysis-Driven Immune Evasion in Microsatellite Instability-High Colorectal Cancer: An Integrated Single-Cell and Spatial Transcriptomics Study Chenchen Li, Peicong Cai, Hengda Zeng, Jianxia Li, Huabin Hu, Jianwei Zhang, Zehua Wu, Ge Qin, Yanhong Deng 2025-09-01 OncoTargets and Therapy 0 17
visibility_off Robust multicellular programs dissect the complex tumor microenvironment and track disease progression in colorectal adenocarcinomas Loan Vulliard, Teresa Glauner, Sven Truxa, Miray Cetin, Yu-Le Wu, R. Simon, Laura Behm, J. Tanevski, Julio Saez-Rodriguez, G. Sauter, Felix J. Hartmann 2025-10-06 ArXiv 0 12
visibility_off Spatial transcriptomic profiling of metastatic renal cell carcinoma identifies chemokine-driven macrophage and CD8+ T-cell interactions predictive of immunotherapy response Charis Kalogirou, M. Krebs, Andreas S Kunz, Oliver Hahn, Hubert Kübler, Marcel Schwinger, Arndt Hartmann, Astrid Schmieder, Markus Eckstein 2025-10-01 Journal for Immunotherapy of Cancer 0 18
visibility_off Computational pathology annotation enhances the resolution and interpretation of breast cancer spatial transcriptomics data Tianyi Li, Qiao Yang, B. Ács, E. Sifakis, Hosein Toosi, Camilla Engblom, K. Thrane, Qirong Lin, Jeff E Mold, Wenwen Sun, Ceren Boyaci, Sanna Steen, Jonas Frisén, Jens Lagergren, J. Lundeberg, Xinsong Chen, Johan Hartman 2025-09-09 NPJ Precision Oncology 0 85
visibility_off Integration of spatial protein imaging and transcriptomics in the human kidney tracks the regenerative potential of proximal tubules Mahla Asghari, Angela R. Sabo, Daria Barwinska, Ricardo Melo Ferreira, M. Ferkowicz, William S. Bowen, Ying-Hua Cheng, D. Gisch, Connor J. Gulbronson, Carrie L. Phillips, Katherine J. Kelly, T. Sutton, James C. Williams, Miguel A Vazquez, John O'Toole, Paul M. Palevsky, Sylvia E. Rosas, S. Waikar, Krzysztof Kiryluk, C. Parikh, J. Hodgin, Pinaki Sarder, Ian H. de Boer, Jonathan Himmelfarb, Matthias Kretzler, Sanjay Jain, Michael T. Eadon, S. Winfree, T. El-Achkar, P. Dagher 2025-08-15 Science Advances 0 75
visibility_off A platform for multisite immune profiling of premetastatic pancreatic cancer at single-cell resolution Elishama N. Kanu, Ashley Fletcher, Jiayin Bao, Ethan S Agritelley, Julia Button, A.M. Eckhoff, Karrie Comatas, Tao Wang, Bin-Jin Hwang, M. Lidsky, S. Zani, D. Blazer, Peter J Allen, Zhicheng Ji, Frank J. Lowery, Sri Krishna, Nicholas D. Klemen, Daniel P. Nussbaum, Erika J. Crosby 2025-08-23 Cancer Immunology, Immunotherapy : CII 0 30
visibility_off Basal cell of origin resolves neuroendocrine-tuft lineage plasticity in cancer. A. Ireland, Daniel A Xie, Sarah B Hawgood, Margaret W Barbier, Lisa Y. Zuo, Benjamin E Hanna, Scarlett Lucas-Randolph, Darren R Tyson, Benjamin L. Witt, R. Govindan, Afshin Dowlati, Justin C. Moser, Anish Thomas, Sonam Puri, C. Rudin, Joseph M Chan, Andrew Elliott, T. Oliver 2025-09-17 Nature 2 36
visibility_off KS03.4.A SPATIAL MULTI-OMIC PROFILING REVEALS DETERMINANTS OF TIL EXPANDABILITY IN HIGH-GRADE GLIOMAS K. Hotchkiss, K. Zhang, A. Corcoran, E. Owens, P. Noldner, C. Railton, K. Van Batavia, Y. Zhou, J. Jepson, K. Singh, R. E. McLendon, K. Batich, A P Patel, K. Ayasoufi, M. Brown, E. Calabrese, J. Xie, J. Conejo-Garcia, B. Shaz, J. Hickey, M. Khasraw 2025-10-01 Neuro-Oncology 0 6
visibility_off Integration of cell-type resolved spatial proteomics and transcriptomics reveals novel mechanisms in early ovarian cancer Andreas Metousis, Hilary A Kenny, Aasa Shimizu, L. Schweizer, S. Ben-Moshe, A. Bilecz, Rahul Krishnan, Jingwen Zhang, Isabel Alcazar, Lucy Kelliher, Mallika Ravi, Tejas Samantaray, Sabrina Richter, Yan Li, Jiying Wang, Sophia Steigerwald, F. Theis, Florian A. Rosenberger, T. Nordmann, S. Yamada, Ricardo R. Lastra, M. Mann, E. Lengyel 2025-08-28 medRxiv 0 17
visibility_off Multicellular tumor-stromal interactions recapitulate aspects of therapeutic response and human oncogenic signaling in a 3D disease model for H3K27M-altered DIPG Meenakshi Upreti, Astgik Petrosyan, M. Thornton, A. Hovsepyan, G. E. Fernandez, David S. Koos, S. Byrum, Samuel G Mackintosh, Jacob K Al-Husseini, Tania Porras, Joseph Ha, A. Tackett, Miqin Zhang, M. Johal, Anat Erdreich-Epstein, Susan Durham, Mark D Krieger, Ashley S Margol, Brendan H. Grubbs, T. Chambers, S. Asgharzadeh, Rex A. Moats, Peter A Chiarelli 2025-09-06 Oncogene 0 48
visibility_off Characterization of the immune landscape in healthy mouse prostate and during prostate cancer progression Despoina Pervizou, Joanna De Chiara, L. Spinelli, Maia Nestor-Martin, Lionel Chasson, Kateryna Len-Tayon, Darya Yanushko, Frédéric Fiore, Marc Bajénoff, Bernard Malissen, Daniel Metzger, Gilles Laverny, S. Henri 2025-09-26 Oncoimmunology 0 4
visibility_off Longitudinal tissue analysis reveals microenvironmental changes correlate with combined immunotherapy and targeted therapy response in metastatic breast cancer , Jien Wang, Hengyu Li, Zhijun Liu, Z. Tian, Xinying Lv, Jianjian Peng, Chuangui Song, Jieqiong Liu 2025-10-01 Journal for Immunotherapy of Cancer 0 6
visibility_off Abstract B110: High-dimensional spatial analysis of murine PDAC microenvironment emphasizes primary and metastatic immune heterogeneity Christina R Larson, Satwik Acharyya, Jace Baines, Ayushi Mandloi, Robert S. Welner, Julienne L. Carstens 2025-09-28 Cancer Research 0 13
visibility_off Cross-species analysis identifies genotype-driven vulnerabilities in lung adenocarcinoma. Angeliki Karatza, Maayan Pour, Jaylen M Powell, Yuan Hao, Dimitris Nasias, Yi Jer Tan, Alfonso Lopez, M. Ciampricotti, Chengwei Peng, Álvaro Quintanal Villalonga, Yeuan Ting Lee, Ruveyda Ayasun, Muhammad Elnaggar, Priyanka Sahu, Igor Dolgalev, Hai Hu, Luis Chiriboga, Cynthia Loomis, Daniel Andrussier, Magdalena A Ploszaj, A. Tsirigos, Peter Meyn, Fred P. Davis, Nicolas Stransky, Gromoslaw A. Smolen, John T. Poirier, Jonathan So, Mark Philips, Harvey I. Pass, Dafna Bar Sagi, Itai Yanai, Kwok-Kin Wong 2025-08-27 bioRxiv : the preprint server for biology 0 70
visibility_off Deciphering the Heterogeneity of Pancreatic Cancer: DNA Methylation-Based Cell Type Deconvolution Unveils Distinct Subgroups and Immune Landscapes Barbara Mitsuyasu Barbosa, Alexandre Todorovic Fabro, Roberto da Silva Gomes, C. Rainho 2025-09-01 Epigenomes 0 20
visibility_off Abstract A003: Mapping the tumor microenvironment: Spatial Transcriptomic insights into ovarian cancer progression and resistance Sara K. Bystrup, Kathleen J. Imbach, Sergi Cervilla García, Arola Fortian Bernabeu, Daniella Grases, Eduard Porta Pardo, Jordi Barretina, Lorena Valdivieso Almeida, Pau Guillén Sentís, Adrià Bernat Peguera 2025-09-19 Cancer Research 0 2
visibility_off Resolving tumor microenvironment heterogeneity to forecast immunotherapy response in triple-negative breast cancer through multi-scale analysis Shihao Sun, Shuang Chen, Kaiyuan Li, Ge Zhang, Nan Wang, Yijia Xu, Xinxing Wang, Jiangrui Chi, Lin Li, Yi Sun 2025-08-19 Frontiers in Oncology 0 4
visibility_off Abstract B108: Functional Dissection of the Highly Plastic Basal Cell State in Pancreatic Cancer Anupriya Singhal, Kate Ryan, Samuel Rose, Hannah C Styers, Nikhita Pasnuri, Jonathan Rub, Jung Yun Kim, Ashlyn Moore, Jill Hallin, Z. Tarcan, O. Basturk, R. Yaeger, James G Christensen, Yan Yan, E. de Stanchina, D. Pe’er, Tuomas Tammela 2025-09-28 Cancer Research 0 70
visibility_off Abstract B105: Distinct cancer-associated fibroblast populations induced by epithelial and mesenchymal PDAC subtypes in a xenograft model Kyu Min Lim, Soo Been Park, Jung-hwan Park, Yoo-Keung Tae, Hee Won Choi, In Rae Cho, Hee Seung Lee, J. Jo 2025-09-28 Cancer Research 0 17
visibility_off P14.25.B DECODING MORPHO-MOLECULAR DIVERSITY IN GLIOSARCOMA AND INSIGHTS INTO RESISTANCE USING SPATIAL TRANSCRIPTOMICS D. Savran, N. Schoebe, N. Berghaus, D. Reuss, M. Ratliff, C. Herold-Mende, S. Krieg, W. Wick, A. von Deimling, D. Heiland, F. Sahm, P. Sievers 2025-10-01 Neuro-Oncology 0 82
visibility_off Crosstalk between heterogeneous cancer-associated fibroblast subpopulations and the immune system in breast cancer: key players and promising therapeutic targets Lu Liu, Weijun Wan, Yilin Chang, Luoquan Ao, Yan Xu, Xiang Xu 2025-09-01 Journal of Experimental & Clinical Cancer Research : CR 0 14
visibility_off Microenvironment of Solid Tumors. T. Korneenko, Nikolay B. Pestov, M. Shakhparonov, Nickolai A. Barlev 2025-09-23 Frontiers in bioscience 0 15
visibility_off Tumour Single‐Cell Bioinformatics: From Immune Profiling to Molecular Dynamics Jane Siu Fan Li, Zoey Zeyuan Ji, Aaron Qi Zhang, C. Ng, Guibin Qiao, Dongmei Zhang, Chunjie Li, Qing Zhang, Ka-Fai To, P. M. Tang 2025-09-01 Journal of Cellular and Molecular Medicine 0 5
visibility_off Spatial Single-Cell Atlas Reveals KSHV-Driven Broad Cellular Reprogramming, Progenitor Expansion, Immune and Vascular Remodeling in Kaposi’s Sarcoma Wen Meng, Arun Das, Harsh Sinha, Rana Naous, P. Bracci, Mike McGrath, Yufei Huang, Shou-Jiang Gao 2025-09-05 bioRxiv 0 72
visibility_off Insights into the Mechanisms of Immune‐Checkpoint Inhibitors Gained from Spatiotemporal Dynamics of the Tumor Microenvironment Yuanyuan Zhang, Zhihua Liu 2025-08-28 Advanced Science 0 8
visibility_off Epigenomic Heterogeneity of Non-Functional Pancreatic Neuroendocrine Tumors Uncovered by Single nucleus and Spatial ATAC Profiling. Dejiang Wang, Xiangjun Di, Fu Gao, Gaocai Li, Liyun Lin, Shujie He, Di Zhang, Junyi Yu Jin, Yuanxin Liang, Michael Cecchini, Jill Lacy, John Kunstman, Pamela Kunz, Jing Du, Yang Liu 2025-09-16 bioRxiv : the preprint server for biology 0 2
visibility_off Abstract A106: Tracing the immune landscape: Temporal and spatial remodeling during pancreatic cancer progression Atul Verma, Doreen Klingler, Linda Bergmayr, T. V. Inamdar, Jonas Rosendahl, Michael Böttcher, Stefan Hüttelmaier, Patrick Michl, Philipp Jurmeister, Sebastian Krug 2025-09-28 Cancer Research 0 4
visibility_off OS13.6.A A SINGLE-CELL AND SPATIAL ATLAS OF MENINGIOMA HETEROGENEITY ACROSS TUMOR CLASSES Y. Tang, R. Banan, S. Maas, D. Calafato, R. Michael, J. Kada Benotmane, R Yan, G. Rukhovich, Z. Ferdinand, V. Venkataramani, A. Suwala, I. Bludau, S. Krieg, W. Wick, A. von Deimling, D. Heiland, M. Gerstung, B. Patel, F. Sahm 2025-10-01 Neuro-Oncology 0 82
visibility_off Decoding the Tumor Microenvironment: Insights and New Targets from Single-Cell Sequencing and Spatial Transcriptomics Shriya Pattabiram, Prakash Gangadaran, Sanjana Dhayalan, Gargii Chatterjee, Danyal Reyaz, Kruthika Prakash, Raksa Arun, R. Rajendran, B. Ahn, K. N. Aruljothi 2025-09-01 Current Issues in Molecular Biology 0 32
visibility_off Abstract B115: Integrated spatial and multi-omic analysis reveals functional niches in the pancreatic cancer microenvironment Noor Shakfa, Ferris Nowlan, Tiak Ju Tan, Sibyl Drissler, Elizabeth Sunnucks, Jennifer L. Gorman, Chengxin Yu, Michael J Geuenich, , Barbara Gruenwald, A. Borgida, , Brendon Seale, Zhen Yuan Lin, Edward L. Chen, Golnaz Abazari, M. Mrkonjic, Julie M. Wilson, Kieran R. Campbell, Robert C. Grant, Anne-Claude Gringas, G. O’Kane, F. Notta, Stephen Gallinger, H. Jackson 2025-09-28 Cancer Research 0 39
visibility_off Unraveling the molecular-pathological characteristics and cellular complexity of the tumor immune microenvironment in metastatic non-small cell lung cancer S. Bharadwaj, J. M. Mierzwicka, Lucie Vaňková, Petr Malý 2025-09-29 Cell Communication and Signaling : CCS 0 19
visibility_off Unraveling the single cell spatial landscapes of melanoma brain metastases A. Manukyan, K. Peters, H. Radbruch, F. Roßner, A. Lehmann, K. Kleo, T. Conrad, J. Altmueller, I. Plumbon, A. Akalin, K. Juerchott, E. Wyler, M. Landthaler, J. Radke, T. Redmer 2025-09-02 None 0 12
visibility_off Abstract B100: Spatial relationships between tumor subtypes and tumor-promoting CAFs with clinical implications X. Peng, Ian C McCabe, Elena V Kharitonova, Ryan Zhao, C. Luan, Arthi Hariharan, Jaewon J Lee, Nancy P. Kren, Yi Xu, Joseph F Kearney, Justin Su, M. LaBella, Susan Tsai, Brian Belt, R. Panni, David Linehan, Y. Pylayeva-Gupta, Alina C Iuga, Naim U Rashid, J. J. Yeh 2025-09-28 Cancer Research 0 19
visibility_off Gene-Expression Programs in Salivary Gland Adenoid Cystic Carcinoma Analyzed Using Single-Cell and Spatial Transcriptomics Ifeoma Ebinumoliseh, Gopikrishnan Bijukumar, Kendall Hoff, K. Brayer, Elaine L. Bearer, Scott A. Ness, Jeremy S. Edwards 2025-09-05 bioRxiv 0 13
visibility_off Transcriptional states of lung cancer microenvironment reveal macrophage subtype dynamics linked to disease progression. Duygu Keremitçi, Özlem Tuna, Aissa Houdjedj, Hilal Kazan, Yasin Kaymaz 2025-09-16 Journal of immunology 0 3
visibility_off 37Integrative multi-omic characterization of the immune landscape in renal cell carcinoma Jennifer Pfeil, Shirley Hui, Daniel Stueckmann, Xiaoyu Zhang, Lisa Martin, Jennifer L. Gorman, Eddy Chen, Somi Afiuni, Jalna Meens, M. Komisarenko, Stéphane Chevrier, Sujana Sivapatham, Julia Szusz, Zhihui Liu, Susan Prendiville, Laurie Ailles, Philip Jonsson, Fred Davis, Cristina Penaranda, Ryan Newton, N. Stransky, Piotr Bielecki, Gromek Smolen, Masoom Haider, Bernd Bodenmiller, Sarah Crome, Gary Bader, Anthony Finelli, H. Jackson, Keith A. Lawson 2025-10-01 The Oncologist 0 16
visibility_off Multi-modal characterization of transcriptional programs that drive metastatic cascades to solid sites and ascites in ovarian cancer Kaiyang Zhang, Essi Kahelin, G. Marchi, Oskari Lehtonen, S. Salloum, K. Lavikka, Yilin Li, Felix Dietlein, A. Lahtinen, J. Oikkonen, S. Hietanen, J. Hynninen, Antti Häkkinen, A. Virtanen, S. Hautaniemi 2025-08-27 bioRxiv 0 45
visibility_off Decoding immune low-response states in ovarian cancer: insights from single-cell and spatial transcriptomics for precision immunotherapy Yalan Yan, Jiaan Lu, Huanyu Luo, Zizhang Wang, Ke Xu, Lexin Wang, Qin Wang 2025-09-19 Frontiers in Immunology 0 6
visibility_off Multi-omics integration uncovers key transcriptional regulators in triple-negative breast cancer spatial heterogeneity Ning Zhang, Ye Zhang, Rui-Fei Yang, Hai-Qing Chu, Abdur Rehman, Lu-Yu Yang, Ya-Yu Li, Xin Zhou, Shou-Ping Gong, Hui-Ling Cao 2025-09-03 Frontiers in Genetics 0 1
visibility_off Integrated Single-Cell and Spatial Transcriptomic Analysis Reveals a Pathological Niche Formed by FAP+ Fibroblasts, Immune, and Endothelial Cells in Psoriatic Lesions Wuwei Zhuang, Qi Zhang, Qingtao Kong, Yun Hui, Jie Shen, Chen Zhang, Hong Sang, Qiao Ye 2025-09-01 Clinical, Cosmetic and Investigational Dermatology 0 2
visibility_off Spatiotemporal analyses of the pan-cancer single-cell landscape reveal widespread profibrotic ecotypes associated with tumor immunity. Ya Han, Lele Zhang, Dongqing Sun, Guang-xu Cao, Yuting Wang, Jiali Yue, Junjie Hu, Zhonghua Dong, Fang Li, Taiwen Li, Peng Zhang, Qiu Wu, Chenfei Wang 2025-08-25 Nature cancer 1 12
visibility_off Hemocytes facilitate interclonal cooperation-induced tumor malignancy by hijacking the innate immune system in Drosophila Sihua Zhao, Yifan Guo, Xiaoyu Kuang, Xiaoqin Li, Chenxi Wu, Peng Lin, Qi Xie, Zongzhao Zhai, D. Kong, Xianjue Ma 2025-08-22 The EMBO Journal 0 17
visibility_off Single-cell and spatial transcriptomics reveal post-translational modifications in osteosarcoma progression and tumor microenvironment Yue Cui, Yue Wu, Dongyu Jiang, Tao Ding 2025-10-09 PLOS One 0 0
visibility_off Functional Precision in Pancreatic Cancer: Redefining Biomarkers with Patient-Derived Organoids C.A. Chew, Cheng Mun Wun, Yi Fang Lee, C.E. Chee, Khek Yu Ho, Glenn Kunnath Bonney 2025-09-01 International Journal of Molecular Sciences 0 1
visibility_off Long-read sequencing of single cell-derived melanoma subclones reveals divergent and parallel genomic and epigenomic evolutionary trajectories Yuelin Liu, Anton Goretsky, A. Keskus, S. Malikić, Tanveer Ahmad, Farid E. Michael Gertz, Rashidi Mehrabadi, Michael Kelly, Maria Hernandez, Charlie Seibert, J. M. Caravaca, Kayla Kline, Yongmei Zhao, Ying Wu, Biraj Shrestha, Bao Tran, Arindam Ghosh, Xiwen Cui, Antonella Sassano, Lakshay Malik, Breeana Baker, Cornelis Blauwendraat, Kimberley J. Billingsley, Eva Pérez-Guijarro, Glenn Merlino, Erin K. Molloy, S. C. Sahinalp, Chi-Ping Day, M. Kolmogorov, Contents 2025-09-02 bioRxiv 0 21
visibility_off Single-cell profiling delineates the tumor microenvironment and immunological networks in patient-derived uterine leiomyosarcoma Yi Guo, Dongsheng Shen, Yuhang Xiao, Chenghao Wu, Meiyi Chen, Lina Yang, Huaifang Li, Xiaowen Tong, Rujun Chen, Fang Li 2025-08-29 Frontiers in Immunology 0 8
visibility_off Abstract B122: Multimodal Validation of a Plastic Transitional State in Pancreatic Ductal Adenocarcinoma Lyanne A. Delgado Coka, Jorge Villar Samaniego, Thomas Beggs, Anastasia Terbaci, Tristan Kwai, Karen Bai, N.Ye Marchenko, Scott Powers, Luisa Escobar Hoyos, Kenneth R. Shroyer 2025-09-28 Cancer Research 0 3
visibility_off Cracking the code: predicting tumor microenvironment enabled chemoresistance with machine learning in the human tumoroid models Michael Bregenzer, P. Mehta, Kathleen M Burkhard, Geeta Mehta 2025-08-19 Npj Biomedical Innovations 0 15
visibility_off Single-cell and spatial transcriptomics integration: new frontiers in tumor microenvironment and cellular communication Wenxin Shi, Zhiqiang Zhang, Xiaotong Xu, Yanpeng Tian, Li Feng, Xianghua Huang, Yanfang Du, Zhongkang Li 2025-10-02 Frontiers in Immunology 0 9
visibility_off Abstract A031: Interrogating microenvironmental changes that impact early pancreatic cancer development Tana Gazdik, Madeline R Kuhn, Chloe L Bowman, Eric J Carlson, Kyra A Lindley, Ellen M. Langer 2025-09-28 Cancer Research 0 16
visibility_off Tumor-Tissue Boundaries as Instructive Interfaces in Breast Cancer Cell Invasion. Cornelia Clemens, T. Zerjatke, Andrine Frank, Hannah Trampert, Nataliia Kotsiuba, I. Glauche, T. Pompe 2025-09-11 Advanced science 0 37
visibility_off SOX9 drives a stem-like transcriptional state and platinum resistance in high-grade serous ovarian cancer A. Duval, Fidan Seker-Polat, Magdalena Rogozinska, Meric Kinali, A. Walts, Ozlem Neyisci, Yaqi Zhang, Zhonglin Li, Edward Tanner, Allison E. Grubbs, Sandra Orsulic, Daniela Matei, M. Adli 2025-10-01 The Journal of Clinical Investigation 0 40
visibility_off Comparative Analysis of Primary and Liver Fibroblasts Reveals MET as a Potent Target in Pancreatic Cancer Metastasis Rima Singh, Natalie Yousefian, Walker M. Allen, Cecily Anaraki, Alica K Beutel, Sabrina E. Calderon, Ian M Loveless, Oliver McDonald, Jennifer P Morton, D. Imagawa, Zeljka Jutric, Thomas F. Martinez, Nina G. Steele, Christopher J Halbrook 2025-09-11 bioRxiv 0 11
visibility_off Abstract A081: Dissecting the Tumor–Immune Landscape of PDAC Liver Metastases to Identify Candidate Drivers of Immune Evasion and Metastatic Outgrowth Ayushi Mandloi, Jace Baines, Meet Patel, Christina R Larson, Robert S. Welner, Julienne L. Carstens 2025-09-28 Cancer Research 0 13
visibility_off Spatial and multi-omic profiling reveals genes and pathways associated with cytotoxic lymphocyte infiltration in malignant rhabdoid tumor Marco A. Marra, Dan Jin, Joshua Dubland, E. Mullen, James Geller, J. Bush 2025-08-19 Research Square 0 2
visibility_off Single-cell transcriptomics identifies an H2AFZ-driven proliferative tumor subpopulation associated with poor prognosis in hepatocellular carcinoma Jihui Huo, Tao Yang, Kai Lei, Zeyao Wang, Zebin Chen, Qi Zhou 2025-10-08 Frontiers in Molecular Biosciences 0 4
visibility_off KS03.5.A DISSECTING THE CELLULAR ARCHITECTURE OF BREAST CANCER BRAIN METASTASES REVEALS PROGNOSTICALLY DISTINCT IMMUNE LANDSCAPES L. Jassowicz, F. Feng, R. Warta, F. Sor, J. Soller, A. Wöllner, C. Lotsch, J K Wong, J. Schlegel, L. Frank, P. Dao Trong, G. Jungwirth, A. Nohman, K. Maaß, M. Barthel, A. Unterberg, S. Krieg, K. Rippe, A. Abdollahi, A. von Deimling, J. Malm, P. Lichter, M. Zapatka, M. Seiffert, C. Herold-Mende 2025-10-01 Neuro-Oncology 0 56
visibility_off Unraveling tumor cell-tumor microenvironment crosstalk through antibody array technologies (Review) Yanlin Wang, Shuhong Luo, Hua Dong, Ruo-Pan Huang 2025-08-18 International Journal of Oncology 0 1
visibility_off Abstract A010: B cell infiltration and clonal expansion in tertiary lymphoid structures: Insights from intravital microscopy Gabrielle Rowe-Brown, Masanobu Komatsu 2025-09-24 Cancer Immunology Research 0 0
visibility_off JS09.7.A GENETIC DRIVES PROMOTE DISTINCT MICROENVIRONMENT ORGANIZATION IN GLIOBLASTOMA J. Zhang, T. Joshi, D. Heiland, D. Hambardzumyan, L. van Hijfte 2025-10-01 Neuro-Oncology 0 3
visibility_off Spatial transcriptomics of retinoblastoma: a visual window on intra-patient heterogeneity A. Moulin, J. Thevenet, L. Mazzeo, S. Tissot, C. Stathopoulos, F. L. Munier, A. Berger 2025-09-02 BMC Cancer 0 11
visibility_off Single-Cell Transcriptomic Analysis Highlights the Impact of NFKB2-Mediated MIF-CD44 Signaling Axis in Endometrioid Endometrial Cancer Lu Zhang, Mengjie Yang, Quan Zhang, Yiqian Zhang, Qiyuan Li, Qionghua Chen 2025-09-01 International Journal of Women's Health 0 2
visibility_off RBM39 degrader invigorates innate immunity to eradicate neuroblastoma despite cancer cell plasticity Shivendra Singh, Jie Fang, Hongjian Jin, Lee-Ann Van de Velde, Andrew Cortes, Jiani Chen, Sivaraman Natarajan, E. Poon, Qiong Wu, Christopher L. Morton, Mary A. Woolard, Waise Quarni, Jacob A Steele, Jon P Connelly, Liusheng He, Rebecca Thorne, Gregory Turner, Thomas Confer, Melissa Johnson, W. Caufield, Burgess Freeman, Timothy Lockey, A. Murphy, P. J. Murray, Takashi Owa, S. Pruett-Miller, Ruoning Wang, L. Chesler, Julie R. Park, A. Davidoff, John Easton, Xiang Chen, Paul G. Thomas, Jun Yang 2025-09-17 Nature Communications 0 38
visibility_off OC48 - Generation of patient-derived in vitro models to unravel medullary thyroid cancer microenvironment and therapy resistance V. Ghiandai, V. Cirello, G. Gazzano, G. Dionigi, C. Colombo, L. Fugazzola, L. Persani, E. S. Grassi 2025-09-01 European Journal of Endocrinology 0 23
visibility_off An Update on Single-Cell RNA Sequencing in Illuminating Disease Mechanisms of Cutaneous T-Cell Lymphoma Sara Suhl, Alexander Kaminsky, Caroline Chen, B. Lapolla, Maggie H. Zhou, Joshua Kent, Abigail Marx, I. Nebo, G. Ramush, Sophia Luyten, Yoni Sacknovitz, Julie Sung, Christina M. Bear, Celine M. Schreidah, Alejandro A. Gru, L. J. Geskin 2025-09-01 Cancers 0 4
visibility_off An injury-associated lobular microniche is associated with the classical tumor cell phenotype in pancreatic cancer Sara Söderqvist, Annika Viljamaa, Natalie Geyer, Anna-Lena Keller, Kseniya Ruksha, Carina Strell, Neda Hekmati, Alexandra Niculae, J. Engstrand, E. Sparrelid, Caroline Salmén, Tânia D. F. Costa, Miao Zhao, Staffan Strömblad, Argyro Zacharouli, P. Ghorbani, Sara Harrizi, Yousra Hamidi, Olga Khorosjutina, Stefina Milanova, Bernhard Schmierer, Béla Bozóky, C. Fernández Moro, Marco Gerling 2025-09-26 Nature Communications 0 14
visibility_off A biofabricated 3D cancer-stroma tumor microenvironment model S. Romanazzo, Peilin Tian, Gagan K Jalandhra, Riddhesh Doshi, J. Gooding, K. Kilian 2025-09-23 Biofabrication 0 7
visibility_off Organoids as Next-Generation Models for Tumor Heterogeneity, Personalized Therapy, and Cancer Research: Advancements, Applications, and Future Directions Ayush Madan, Ramandeep Saini, Nainci Dhiman, Shu-Hui Juan, M. K. Satapathy 2025-10-08 Organoids 0 10
visibility_off Spatial Transcriptomics and snRNA-seq Expose CAF Niches Orchestrating Dual Stromal-Immune Barriers in Hepatocellular Carcinoma. Yingxue Li, Changxiang Huan, Haoting Sun, Wei Zhang, Zhen Guo, Chuanyu Li, Jia Yao, Zhiqi Zhang, Shizhe Yu, Qiongzhu Dong, Lunxiu Qin, Jinze Li, Lianqun Zhou 2025-10-07 Advanced science 0 11
visibility_off Abstract PR-11: B cell infiltration and clonal expansion in tertiary lymphoid structures: Insights from intravital microscopy Gabrielle Rowe-Brown, Masanobu Komatsu 2025-09-24 Cancer Immunology Research 0 0
visibility_off P64 | EX VIVO EXTRACTION OF GLIOMA SECRETOME: A NOVEL MICROENVIRONMENT-BASED PROTOCOL FOR METABOLIC AND MOLECULAR PROFILING 2025-08-21 European Journal of Histochemistry 0 0
visibility_off A Conserved FABP5high Macrophage Subset Promotes Fibrosis and Carcinogenesis in Advanced Liver Disease Wenhao Ge, Lifeng Ma, Yu Huang, W. E., Shujing Lai, Bijun Cui, Jingjing Wang, Yutian Ji, Daiyuan Liu, Song Ye, Yang Kong, Jiarong Zhou, Chengxuan Yu, Yingsheng Wu, Qiang Sun, Dongkai Zhou, Wei Zhu, Yuan Ding, Xiaoping Han, Guoji Guo, Weilin Wang 2025-08-28 Liver International 0 18
visibility_off Derivation of Genetically Defined Murine Hepatoblastoma Cell Lines with Angiogenic Potential Keyao Chen, Ahmet Toksoz, Colin Henchy, Jessica Knapp, Jie Lu, S. Ranganathan, Huabo Wang, E. V. Prochownik 2025-09-01 Cancers 0 39
visibility_off Abstract A048: Robust Pancreatic Cancer Liver Metastatic Model System Reveals Cancer Cell Dependent Organotropism and Site-specific Tumor Microenvironment Regulation Christina R Larson, Jace Baines, Ayushi Mandloi, Meet Patel, Tuan Tran, Nailah Jones, A. Khaliq, Christopher A. Risley, Robert S. Welner, Satwik Acharyya, Julienne L. Carstens 2025-09-28 Cancer Research 0 13
visibility_off MAIT cells promote cancer progression and regulatory T cell accumulation in bladder tumor microenvironment Inbar A Habaz, Xuejin Ou, Nicole I Wang, Angela Schincaglia, Valeryia Shydlouskaya, Agetha Mahendran, F. Martinez-Santiesteban, Dylan Doolabi, Yige Bao, Ahmad R Movasseghi, Julius Haruna, Nicholas E. Power, Timothy J Scholl, Melissa J Huynh, Alp Sener, S. M. Haeryfar, Dr S M Mansour Haeryfar 2025-09-01 Journal for Immunotherapy of Cancer 0 11
visibility_off Comprehensive analysis of the papillary thyroid carcinoma identifies CSGALNACT1 as a proliferation driver and prognostic biomarker Yu Zhao, Juan Zhang, Yong Yao, Linna Yu 2025-08-29 Frontiers in Cell and Developmental Biology 0 1
visibility_off Single-cell multiomic modelling of early metastatic events promoted by the extracellular matrix. Hyun Jin Lee, Jun Hyeong Lee, Junho Kang, Kyeonghui Kim, Youngwon Cho, Jihyun Park, Sang-Hyun Song, J. Kwon, Young-Joon Kim, Woong-Yang Park, Tae-You Kim, Jong-Eun Park, Pilnam Kim, Jung Kyoon Choi 2025-09-15 British journal of cancer 0 29
visibility_off Abstract B113: Imaging mass cytometry guided shallow whole genome sequencing for phenotype informed regional copy number profiling in a pancreatic tumor Tiak Ju Tan, Deni Van. Sechie, Ferris Nowlan, Noor Shakfa, Elizabeth Sunnucks, Sibyl Drissler, Jennifer L. Gorman, Michael J Geuenich, Chengxin Yu, Grannie O. Kane, F. Notta, Robert C. Grant, Julie M. Wilson, Stephen Gallinger, Kieran R. Campbell, H. Jackson 2025-09-28 Cancer Research 0 39
visibility_off P01.18.B MODELING GLIOBLASTOMA TREATMENT RESPONSES: INSIGHTS INTO TUMOR PLASTICITY AND THE ROLE OF THE TUMOR MICROENVIRONMENT M. de Lucas Sanz, H. Allahverdi, B. Nosirov, P. Moreno Sánchez, M. Baroni Milan, A. Lipsa, M. Rezaeipour, C. Dording, D. Brown, J. M. Langlands, K. Grzyb, Y. Yabo, J. Zhang, D. Heiland, A. Michelucci, P. Nazarov, A. Gołȩbiewska 2025-10-01 Neuro-Oncology 0 28
visibility_off P04.13.B SPATIAL HETEROGENEITY OF CAR-T ANTIGEN EXPRESSION IN GLIOBLASTOMA Y Kong, J. Zhang, F. Sahm, G. Kastner, M. Mühlbauer, E. Grabis, P. Heinrichs, J. Straehle, R. Sankowski, R. Roelz, J. Beck, D. Heiland, N. Neidert 2025-10-01 Neuro-Oncology 0 5
visibility_off Clonal expansion of cytotoxic CD8⁺ T cells in lecanemab-associated ARIA Lance A. Johnson, Kai Saito, Akhil Pallerla, Jessica L Funnell, Ashley R. Ezzo, Chelsea L. Song, Douglas A Harrison, Noah J. Norton, Lauren C. Moore, L. Eldik, D. Fardo, Greg E. Cooper, Josh M Morganti 2025-09-21 None 0 47
visibility_off Abstract B116: Integrative proteogeonomic profiling of PDAC reveals updated epithelial subtypes and cross-omic predictors of survival Ferris Nowlan, Noor Shakfa, Tiak Ju Tan, Sibyl Drissler, Elizabeth Sunnucks, Jennifer L. Gorman, Chengxin Yu, , Barbara Gruenwald, A. Borgida, Edward L. Chen, Golnaz Abazari, M. Mrkonjic, Julie M. Wilson, Kieran R. Campbell, Robert C. Grant, Anne-Claude Gringas, G. O’Kane, F. Notta, Stephen Gallinger, H. Jackson 2025-09-28 Cancer Research 0 39
visibility_off Profiling of immune cell subsets and functional characteristics of cervical cancer based on single cell RNA sequencing Yue Yuan, Dejun Sun, Mingyue Yang, Ying Xia, Chunli Yuan, Xiaosong Wang 2025-09-25 Frontiers in Immunology 0 2
visibility_off Single-cell profiling uncovers PTPRG-driven stemness in malignant plasma cells and signatures of treatment failure in multiple myeloma Jiewen Tan, Jinman Zhong, Yueping He, Yunman Xu, Chang Chen, Dan Xiong 2025-09-18 Frontiers in Immunology 0 1
visibility_off Spatially Resolved Transcriptomics: Revealing Tumor Microenvironment Heterogeneity to Advance Cancer Immunotherapy. Dan Liu, Lu Xiao, Yuyuan Wu, Chensirong Yue, Mengmeng Li, Yuanpei Sun, Chao Yang 2025-09-04 Small methods 0 12
visibility_off Abstract B129: Tracking genome evolution and chemoresistance in pancreatic cancer A. Lumeau, Molly A Guscott, N. M. Père, Isabel Nichols, Benjamin Werner, Nelson Dusetti, Sarah E. McClelland 2025-09-28 Cancer Research 0 4
visibility_off Learning the cellular origins across cancers using single-cell chromatin landscapes Mohamad D. Bairakdar, Wooseung Lee, Bruno Giotti, Akhil Kumar, Paula Štancl, Elvin Wagenblast, Dolores Hambardzumyan, P. Polak, R. Karlić, A. Tsankov 2025-09-17 Nature Communications 1 17
visibility_off P02.04.A UNCOVERING AND TARGETING METABOLIC REGULATORS OF IMMUNOSUPPRESSIVE LIPID-LADEN MACROPHAGES IN GLIOBLASTOMA M. Farber, T. van Schaik, D. Aschmann, M. Boon, D. Kloosterman, J. Erbani, L. Akkari 2025-10-01 Neuro-Oncology 0 8
visibility_off Spatial profiling identifies tumor-associated stroma enrichment and MIF as potential immunotherapy targets in primary Ewing sarcomas. Christopher Kuo, K. Giannikou, Nuoya Wang, Mikako Warren, Andrew Goodspeed, N. Shillingford, Masanori Hayashi, M. Raredon, James F. Amatruda 2025-09-23 Clinical cancer research : an official journal of the American Association for Cancer Research 0 19
visibility_off Multiomics combined with machine learning defines unique molecular subtypes of cholangiocarcinoma and identifies TNK1 as a therapeutic target. Dong-Gi Mun, Erik Jessen, Jennifer Tomlinson, D. Carlson, R. Budhraja, R. Alva-Ruiz, A. Abdelrahman, Ryan Watkins, Lindsey Gregory, Chantal McCabe, Chen Wang, Rondell P. Graham, Kathryn Woods, Martin Golkowski, Marshall Baker, Greg J. Gores, S. Ilyas, Caitlin B Conboy, Ellen L. Larson, Jack W Sample, Enis H Ozmert, Richard K Kandasamy, M. Borad, Lewis R Roberts, Joshua Andersen, Akhilesh Pandey, R. Smoot 2025-09-29 Hepatology 0 62
visibility_off TCRscape: a single-cell multi-omic TCR profiling toolkit R. Perik-Zavodskii, O. Perik-Zavodskaia, M. Volynets, S. Alrhmoun, Sergey Sennikov 2025-09-05 Frontiers in Bioinformatics 0 5
visibility_off Enhancer Reprogramming Reveals the Tumorigenic Role of PTPRZ1 in Lung Squamous Cell Carcinoma. Yong-Qiang Ning, Jie Wang, Yihui Zhang, Hongrui Li, Zenan Jiang, Xinyu Su, Xiao Yang, Xiaoxuan Wu, Bing Wei, Jianming Ying, Jian Yan, Wenbin Li 2025-09-03 Advanced science 0 6
visibility_off Abstract A025: Genomics-informed agent-based models drive new understanding of the role of neoplastic phenotype transitions in human PDAC invasion J. I. Johnson, Daniel Bergman, T. Lopez-Vidal, Eric Cramer, Fatemeh Shojaeian, Y. Dance, Jacob T. Mitchell, Elizabeth M. Jaffee, N. Zaidi, Elizabeth D. Thompson, Jacquelyn W. Zimmerman, A. Kiemen, Luciane T. Kagohara, Y. H. Chang, Jude M. Phillip, Laura D. Wood, Paul Macklin, Genevieve L. Stein-O’Brien, E. Fertig 2025-09-28 Cancer Research 0 47
visibility_off Single-cell transcriptomic profiling reveals distinct tumor microenvironments in HPV-associated penile squamous cell carcinoma Lianbang Zhu, Deyun Shen, Jiahao Zhou, Chen Cheng, Zhiyao Xu, Yong Liang, Wen Pan, Tao Tao 2025-09-01 Precision Clinical Medicine 0 2
visibility_off Dissecting Tertiary Lymphoid Structures in Cancer: Maturation, Localization and Density Guang-Liang Su, Meng‐Jie Zhang, Hao Li, Zhijun Sun 2025-08-30 Theranostics 0 13
visibility_off Abstract B106: Elucidating the clonal dynamics and epigenetic regulators of PDAC initiation in inducible neoplastic organoid models Connor J. Hennessey, Minh T Than, Ben Z. Stanger, Sydney M. Shaffer 2025-09-28 Cancer Research 0 5
visibility_off Human single-cell atlas analysis reveals heterogeneous endothelial signaling Zimo Zhu, Rongbin Zheng, Yang Yu, Lili Zhang, Kaifu Chen 2025-08-19 bioRxiv 0 2
visibility_off Personalised immunotherapy strategies informed by single cell profiling in thyroid cancer: a mini review Ruyu Chen, Zhimin Wang, Xueying Chen, Yangling Huang, Fengnuan Zhang, Tianshu Gao 2025-09-01 Frontiers in Immunology 0 2
visibility_off Tumor microenvironment response to neoadjuvant therapy in breast cancer: insights from single-cell and spatial omics. Qingzhong Wu, Jiawei Yang, Da Zhang, Haowei Xu, Yuhang Yu, Yu Zheng 2025-09-13 Medical oncology 0 0
visibility_off Coordinated changes in midkine expression and midkine-associated multiomic profile in glioma microenvironment Mieszko Lachota, K. Zielniok, Agata Gozdz, Patrycja Szpak, Ilona Kalaszczyńska, Radosław Zagożdżon 2025-08-20 Scientific Reports 0 9
visibility_off Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment. Dimitri N. Sidiropoulos, Sarah M. Shin, Meredith Wetzel, Alexander Girgis, Daniel Bergman, Ludmila Danilova, Susheel Perikala, Daniel H. Shu, Janelle M. Montagne, Atul Deshpande, J. Leatherman, Lucie Dequiedt, Victoria Jacobs, Aleksandra Ogurtsova, Guanglan Mo, Xuan Yuan, Dmitrijs Lvovs, Genevieve L. Stein-O’Brien, M. Yarchoan, Qingfeng Zhu, Elizabeth I. Harper, A. Weeraratna, A. Kiemen, E. Jaffee, Lei Zheng, W.J. Ho, Robert A. Anders, E. Fertig, L. T. Kagohara 2025-08-15 Cancer immunology research 1 47
visibility_off SMOC2 high myofibroblastic cancer-associated fibroblast drives primary cilia-associated tumor microenvironment remodeling and poor prognosis in gastric cancer. Qiqi Xu, Changjiang Yang, Jingyuan Ning, Yunze Niu, Xuesong Zhao, Long Zhao, Caihong Wang, Shan Wang, Y. Ye, Zhanlong Shen 2025-08-30 Chinese journal of cancer research = Chung-kuo yen cheng yen chiu 0 9
visibility_off Reproducible single-cell annotation of programs underlying T cell subsets, activation states and functions Dylan Kotliar, Michelle Curtis, Ryan Agnew, Kathryn Weinand, A. Nathan, Y. Baglaenko, Kamil Slowikowski, Yu Zhao, P. Sabeti, Deepak A. Rao, Soumya Raychaudhuri 2025-09-03 Nature Methods 0 29
visibility_off P18.15.A IMMUNOCOMPETENT GLIOBLASTOMA ORGANOIDS FOR PERSONALIZED IMMUNE PROFILING T. Koenig, L. M. Reindl, P. Zeiner, K. Weber, A. Rombach, M. Armbrust, P. Cakmak, W. Wels, T. Broggini, K. Plate, M. Czabanka, J. Steinbach, M. Burger, E. Ullrich, T. Buhlmann, A. Hau 2025-10-01 Neuro-Oncology 0 17
visibility_off Abstract B118: Investigating the tumor microenvironment’s role in lineage fate determination in pancreatic ductal adenocarcinoma Jennifer Claire Muscat, Eva Freckmann, Andrew S. Papanastasiou, Jennifer P. Morton, Crispin J. Miller 2025-09-28 Cancer Research 0 1
visibility_off P12.31.B A NOVEL ORGANOID MODEL RETAINING THE GLIOMA MICROENVIRONMENT FOR PERSONALIZED DRUG SCREENING AND THERAPEUTIC EVALUATION C Zheng, Q. Chen, Z Fang, P. Wang, D. Zhang, Y. Feng, Y. Zhang, T. Jiang, L. Zheng, Z. Bao 2025-10-01 Neuro-Oncology 0 0
visibility_off A spatial map of MAPK-activated immunosuppressive myeloid populations in pediatric low-grade glioma. Augusto Faria Andrade, Romain Sigaud, Evan Puligandla, Bridget Liu, E. Karimi, Alva Annett, M. Rezanejad, Wajih Jawhar, Robert Taylor, Yi Cao, S. Schmid, F. Selt, P. Hernáiz Driever, Svea Horn, P. Sievers, M. Prinz, M. Glatzel, Christian Mawrin, C. Hartmann, C. Monoranu, Liza Konnikova, F. Sahm, Stefan M. Pfister, Olaf Witt, David T. W. Jones, A. Koch, Claudia L Kleinman, David Capper, L. Walsh, N. Jabado, T. Milde 2025-09-15 Nature immunology 0 57
visibility_off Abstract A087: Spatial-resolved single-cell analysis of the tumor microenvironment in Alaska Native colorectal cancer patients reveals novel biomarkers for prognosis Hang Yin, Diana Redwood, Kimberly Smythe, Kristin L. Robinson, Daniel Jones, Mcgarry Houghton, K. C. Barry, Amanda L Koehne, Elizabeth Donato, Cecilia Yeung, MingGang Lin, James Tiesinga, T. Harrison, Sushma Thomas, Li Hsu, Jane C Figueiredo, Li Li, Christopher I Li, Ulrike Peters, J. Huyghe 2025-09-18 Cancer Epidemiology, Biomarkers & Prevention 0 38
visibility_off Generations in Flux: Tracking the Birth of Cellular Heterogeneity in Cancer. Aaron McKenna 2025-08-18 Cancer research 0 1
visibility_off Molecular Subtypes of Neuroendocrine Carcinoma: From Chaos to Consensus. Zhanyu Wang, Nan Sun, Jie He, E. Redin, Charles M. Rudin 2025-10-08 Annual review of pathology 0 8
visibility_off Human Retinal Organoid Modeling Defines Developmental Window and Therapeutic Vulnerabilities in MYCN-Amplified Retinoblastoma Jinkyu Park, Gang Cui, Jiyun Hong, H. Jeong, Minseok Han, Min Seok Choi, Jeong Ah Lim, Sanguk Han, Christopher Seungkyu Lee, Min Kim, Sangwoo Kim, Junwon Lee, S. Byeon 2025-09-01 International Journal of Molecular Sciences 0 32
visibility_off Single‐Cell Profiling of Pediatric High‐Grade Gliomas Reveals OPC‐Like Subpopulations Driving Tumorigenic Lineage Transitions Tian Tian, Chong Huang, Lusheng Li 2025-09-01 Pediatric Discovery 0 0
visibility_off Stromagenesis and cancer‐associated fibroblast heterogeneity in primary tumors and metastasis: focus in non‐small cell lung cancer Alejandro Bernardo, N. Díaz-Valdivia, Patricia Fernández-Nogueira, J. Alcaraz 2025-09-04 FEBS Open Bio 0 4
visibility_off Pan-cancer single-cell and spatial transcriptomics implicate cancer-associated fibroblasts in neutrophil immunosuppressive phenotypic transitions and immunotherapy resistance. Zhiyu Guo, Xujia Li, Lingli Huang, Yue Yan, Mengge Gao, Jinsheng Huang 2025-10-10 Functional & integrative genomics 0 5
visibility_off Dissecting cross‐lineage tumourigenesis under p53 inactivation through single‐cell multi‐omics and spatial transcriptomics Xinru Wang, Yuqing Mei, Xueyi Wang, Hanyu Wu, Renying Wang, Peijing Zhang, Guodong Zhang, Jiaqi Li, Mengmeng Jiang, Xing Fang, Lifeng Ma, Yuan Liao, Danmei Jia, Haofu Niu, E. Weigao, Haide Chen, Lei Yang, Shuang Zhang, Tingyue Zhang, Yincong Zhou, Qi Zhang, He Huang, H. Ouyang, Ming Chen, Tingbo Liang, Jinrong Peng, Jingjing Wang, Guoji Guo, Xiaoping Han 2025-08-31 Clinical and Translational Medicine 0 22
visibility_off Quantitative Cell Type Specific Immunopeptidome Analysis of Macrophage and Tumor Co-evolution Reveals Therapeutic MHC-I Peptides in Glioblastoma. Yufei Cui, Kien Phuong, Nouran S Abdelfattah, Heidi M Temple, L. Maiorino, B. J. Kim, Jonathan Dye, K. Yu, Stefani Spranger, Forest M. White 2025-09-18 Cancer research 0 11
visibility_off Decoding the association between mucosal-associated invariant T cells and prostate cancer via multi-omics analysis Lichuan Lai, Rensheng Huang, Keke Si, Junming Huang, Lianli Yin 2025-10-03 Medicine 0 6
visibility_off Tracing the evolution of single-cell 3D genomes in Kras-driven cancers. Miao Liu, Shengyan Jin, Sherry S Agabiti, Tyler B Jensen, Tianqi Yang, Jonathan S. D. Radda, Christian F. Ruiz, Gabriel Baldissera, Moein Rajaei, Fangyong Li, Jeffrey P. Townsend, M. Muzumdar, Siyuan Wang 2025-08-18 Nature genetics 0 14
visibility_off A novel murine model for sporadic, malignant peripheral nerve sheath tumors, driven by BrafV600E and Pten loss. Julien Debbache, Myriam Gwerder, Elisabeth Rushing, Lukas Sommer 2025-10-09 Disease models & mechanisms 0 11
visibility_off High content-imaging drug synergy screening identifies specific senescence-related vulnerabilities of mesenchymal neuroblastomas Sonja Herter, Marta Emperador, Kyriaki Smyrilli, Daniela Kocher, Simay Celikyürekli, Constantia Zeiser, Xenia F. Gerloff, Sina Kreth, K. Henrich, K. Maass, Johanna Rettenmeier, T. Grünewald, H. Peterziel, Frank Westermann, A. Hamacher-Brady, Olaf Witt, Ina Oehme 2025-08-25 Cell Death & Disease 0 33
visibility_off Progenitor-exhausted T cell as prognostic indicator in esophageal squamous cell carcinoma: illuminating their key contribution to tumor immunity Yi Liu, Hongwei Jiang, Zhang Fang, Bin Xu, Junjun Chen, Xiao Zheng, Renhao Geng, Lujun Chen 2025-09-26 Frontiers in Immunology 0 8
visibility_off Spatial transcriptome analysis of the human eyelid depicts meibomian gland cell differentiation: A pilot study Hans Binder, Ulrike Hampel, H. Loeffler-Wirth, Florian Hansmann, Helga Pfannkuche, Maria Schmidt, Marlon R. Schneider 2025-09-01 Physiological Reports 0 9
visibility_off Complexity-Informed Causal Modeling of Neurodevelopmental Trajectories in Pediatric High-Grade Gliomas: Divergences from Neural Stem Cell Signatures Abicumaran Uthamacumaran, Hector Zenil 2025-08-16 ArXiv 0 8
visibility_off Integrating single-cell omics and materials science for uveal melanoma: from mechanistic insights to precision therapeutics Shouyong Fu, Changfei Li 2025-09-10 Frontiers in Oncology 0 0
visibility_off Cancer-associated fibroblasts drive lung adenocarcinoma progression via THBS2-mediated epithelial-mesenchymal transition. Yuqing Ren, Ruijie Ming, Anning Zuo, Shutong Liu, Yuhao Ba, Yuyuan Zhang, Yukang Chen, Teng Pan, Peng Luo, Q. Cheng, Jinhai Deng, Yi Yue, Hui-Xian Xu, Siyuan Weng, Xinwei Han, Dongdong Zhou, Zaoqu Liu 2025-09-19 Oncogene 0 25
visibility_off Abstract PR015: Tumor-derived IL-4 links chemotherapy to immunotherapy resistance in ovarian cancer Gurkan Mullaoglu, Hunter T. Potak, Paula Guerrero Gonzalez, Gardner Davlin, Joshua Leinwand, Dmitriy Zamarin, Brian D. Brown, Alessia Baccarini 2025-09-19 Cancer Research 0 20
visibility_off CyTOF profiling of bone marrow immune dynamics across myeloma stages Danka Cholujová, G. Beke, Ľuboš Kľučár, Ľ. Drgoňa, Zuzana Valuskova, M. Leiba, E. Kastritis, David M. Dorfman, Kenneth C. Anderson, J. Jakubikova 2025-08-18 Oncoimmunology 0 74
visibility_off OS12.5.A SPATIALLY RESOLVED FUNCTIONAL PROFILING FOR GLIOBLASTOMA A. Buck, S. Lee, I. Sakic, R. Wegmann, J. Mena, F. Vasella, J. Friesen, L. Regli, E. Le Rhun, A. Zeitlberger, N. Tatari, G. Hutter, M. Neidert, M. Weller, B. Snijder, T. Weiss 2025-10-01 Neuro-Oncology 0 33
visibility_off NOX1 and NPY1R mark regional colon stem cell populations that serve as cancer origins in vivo. Maxime Gasnier, Tanysha Chi-Ying Chen, Swathi Yada, Sowmya Sagiraju, Yusuke Yoshikawa, Stefano Perna, H. Lim, Bernett Lee, Nick Barker 2025-09-02 Nature cell biology 1 6
visibility_off Tumor-associated macrophages in meningiomas: a novel biomarker for poor survival outperforming the benefits of T cells C. Lotsch, R. Warta, Fang Liu, G. Jungwirth, C. Rommel, M. Barthel, K. Lamszus, A. Kessler, Niels Grabe, Mario Loehr, R. Ketter, C. Senft, S. Maas, P. Sievers, Manfred Westphal, Sandro M Krieg, A. Unterberg, M. Simon, Andreas von Deimling, F. Sahm, D. Raleigh, C. Herold-Mende 2025-10-09 Acta Neuropathologica 0 82
visibility_off Advancements and challenges in culturing patient-derived cancer cells for personalized therapeutics Yatian Fu, B. L. Khoo, Chwee Teck Lim 2025-09-08 Frontiers in Lab on a Chip Technologies 0 25
visibility_off OS05.2.A DECIPHERING THE LONGITUDINAL TRAJECTORIES OF GLIOBLASTOMA ECOSYSTEMS BY INTEGRATIVE SINGLE-CELL GENOMICS A. Spitzer, K Johnson, M. Nomura, L. Garofano, D. Nehar-Belaid, N. Galili Darnell, A. Greenwald, L. Bussema, Y. Oh, F. Varn, F. D’Angelo, S. Gritsch, K J Anderson, S. Migliozzi, L. G. Gonzalez Castro, T. Chowdhury, N. Robine, C. Reeves, J. Park, A. Lipsa, F. Hertel, A. Gołȩbiewska, S. Niclou, L. Nusrat, S. Kellett, S. Das, H. Moon, S. Paek, F. Bielle, A. Laurenge, A. D. Di Stefano, B. Mathon, A. Picca, M. Sanson, S Tanaka, N. Saito, D. M. Ashley, S. Keir, K. L. Ligon, J. Huse, W. Yung, A. Lasorella, A. Iavarone, R. Verhaak, I. Tirosh, M. Suvà 2025-10-01 Neuro-Oncology 0 53
visibility_off P02.01.B PERICYTES ORCHESTRATE A TUMOR-SUPPRESSIVE MICROENVIRONMENT BY IMPINGING ON THE CROSSTALK BETWEEN MACROPHAGES AND TUMOR-INITIATING CELLS IN GLIOBLASTOMA S. Braun, P. Bolivar, C. Oudenaarden, J. Sjölund, M. Bocci, K. Harbst, M. Safaee Talkhoncheh, B. Phung, E. Cordero, E. Johansson, R. Rosberg, G. B. Jönsson, A. Pietras, K. Pietras 2025-10-01 Neuro-Oncology 0 6
visibility_off Abstract B037: Dynamic characterization of tumor-microenvironment factors that drive pediatric low-grade gliomas Jenna Robinson, Sarah Reel, Joohee Lee, Marilyn Cobb, Shriya Rangaswamy, Timothy H. Chang, Ria Kedia, Michelle Boisvert, David Jones, T. Phoenix, P. Bandopadhayay 2025-09-25 Cancer Research 0 41
visibility_off Abstract B124: Rapid, high-plex spatial proteomic profiling of pancreatic cancer using a pancreas-focused-assay and customized analysis workflow Andressa Dias Costa, Emma C Coleman, Audrey P. Lacy, Carla Rujana, Dalia Elganainy, Micaela Morgado, Cibelle Lima, C. Nguyen, C.Sloane Furniss, A. Aguirre, B. Wolpin, Simona Cristea, Jonathan A. Nowak 2025-09-28 Cancer Research 0 6
visibility_off A unified network systems approach uncovers a core novel program underlying T follicular helper cell differentiation Alisa A. Omelchenko, Syed A. Rahman, Vinayak V. Viswanadham, Grace J. Yuen, Perla M. Del Rio Estrada, Valentino D’Onofrio, Yijia Chen, Na Sun, Hamid Mattoo, Chinmay G. Varma, Gonzalo Salgado, Maribel S. Nava, Lady C. Ruiz, Dafne D. Rivera, S. A. Rios, Sudhir P. Kasturi, Susan P. Ribeiro, M. Shlomchik, Amanda C. Poholek, Shiv S. Pillai, Rebecca A. Elsner, V. Mahajan, Jishnu Das 2025-08-24 bioRxiv 0 95
visibility_off Novel Diffuse Midline Glioma-on-Chip Recapitulating Tumor Biophysical Microenvironment to Assess the Heterogeneity of Response to Therapies. Lisa Terrassoux, Calypso Hazard, Agathe Laratte, Joanne Balsamelli, Mélanie Arcicasa, Elisa Fong, Léo Baland, Fabrice Soncin, Giovanni Cappello, C. Maurage, Sebastien Janel, Antony Bazir, Fabrizio Cleri, Anthony Treizebré, Eric Lartigau, Yousr Rekik, Samuel Meignan, Alessandro Furlan 2025-09-29 Small 0 59
visibility_off Cancer genomic alterations and microenvironmental features encode synergistic interactions with disease outcomes. Masroor Bayati, Zoe P Klein, Alexander T Bahcheli, Mykhaylo Slobodyanyuk, Jeffrey To, Kevin C L Cheng, Jigyansa Mishra, Diogo Pellegrina, K. Guevara-Hoyer, Chris McIntosh, Mamatha Bhat, J. Reimand 2025-09-03 Molecular cancer research : MCR 0 47
visibility_off Abstract A127: Vascular heterogeneity influences treatment response in pancreatic cancer Samantha B Kemp, William B. Sullivan, Benjamin M. Kahn, Jonathan H. Sussman, Il-Kyu Kim, Takeshi Katsuda, Sidney Mahan, Margo Orlen, Samuel D Zwernik, Kailee M Hartway, Nina G. Steele, A. Witkiewicz, Erik S. Knudsen, Ben Z. Stanger 2025-09-28 Cancer Research 0 8
visibility_off Abstract IA008: Discovery of fitness fingerprints and flower monoclonal ab therapy in ovarian cancer Rajan Gogna 2025-09-19 Cancer Research 0 3
visibility_off Spatial heterogeneity reveals an evolutionary signature predicting therapeutic response and clinical outcomes in hepatocellular carcinoma Shangyi Luo, Li Liu, Yang Sun, Jian Shi, Yajing Zhang 2025-08-18 Frontiers in Bioinformatics 0 1
visibility_off Single-vessel transcriptome map pathological landscapes and reveal NR2F2-mediated smooth muscle cell phenotype acquisition in capillary malformations Vi Nguyen, Irving Mao, Siwuxie He, Isabella Castellanos, Mackenzie Azuero, Marcelo L Hochman, Yin Rong, L. Pernomian, Elliott H Chen, Harold I Friedman, Yan-Hua Chen, Qun Lu, Daping Fan, Camilla F Wenceslau, Dong-bao Chen, Stuart Nelson, Anil G Jegga, Yunguan Wang, Wenbin Tan 2025-09-07 bioRxiv 0 3
visibility_off P18.25.B SPATIALLY CONFINED TRANSCRIPTIONAL RESPONSES CHARACTERIZE THE EARLY PRE-METASTATIC NICHE IN BRAIN METASTASIS W. R. Hube, F. Schallerer, L. Bergmayr, R. Piecyk, T. Eska, K. J. Mueller, E. Nicolaishvili, L. Sevenich, K. Unger, P. Jurmeister, L. von Baumgarten, P. Harter 2025-10-01 Neuro-Oncology 0 1
visibility_off Divergent Clonal Evolution and Early Dissemination Promote Genetic Heterogeneity of Metastases in Castration Resistant Prostate Cancer. Noshad Hosseini, R. Mannan, Ryan J. Rebernick, Fengyun Su, Rui Wang, Xuhong Cao, Ana Lako, Dattatreya Mellacheruvu, Jing Hu, J. Alumkal, Zachery R. Reichert, Rohit Malik, Rohit Mehra, A. Chinnaiyan, M. Cieslik 2025-08-18 Cancer research 0 169
visibility_off Unveiling the intricate dynamics of the interplay between triple-negative breast cancer cells and the blood-brain barrier endothelium Ana Rita Garcia, Ana Rita Vaz, Rui Malhó, Hugo M. Botelho, Inês Figueira, M. A. Brito 2025-08-28 Acta Neuropathologica Communications 0 4
visibility_off A three-dimensional ex vivo model recapitulates in vivo features and drug resistance phenotypes in childhood acute lymphoblastic leukemia. Magdalini Kanari, Iria Jimenez Garcia, Fabio Steffen, L. Krattiger, Charles Bataclan, Wangjie Liu, Benjamin R. Simona, Bart Deplancke, O. Naveiras, M. Ehrbar, B. Bornhauser, Jean-Pierre Bourquin 2025-09-10 Leukemia 0 46
visibility_off Spatially organized lymphocytic microenvironments in high grade primary prostate tumors Ali Amiryousefi, Jeremiah Wala, Jia-Ren Lin, Brian Labadie, A. Atmakuri, Z. Maliga, Eamon Toye, K. Chaudagar, Madeleine S Torcasso, Shannon Coy, G. Fanelli, Brigette Kobs, F. Socciarelli, Andréanne Gagné, Eliezer Van Allen, Akash Patnaik, P. Sorger 2025-09-21 bioRxiv 0 32
visibility_off Abstract B126: Single-cell and spatially resolved atlas of pancreatic cancer reveals immunophenotypes associated with clinical outcome Gabriel Francisco Pozo de Mattos Pereira, Julia Crispim da Fontoura, Marvin Paulo Lins, A. Osvaldt, Simone Marcia dos Santos Machado, E. Filippi-Chiela, Cristina Bonorino 2025-09-28 Cancer Research 0 20
visibility_off Spatially Discontinuous Mutation Topographies in Ductal Carcinoma in Situ Reveal Non-Competitive Growth Dynamics. Marc D. Ryser, Matthew A Greenwald, Daniel L. Monyak, I. Sorribes, Lorraine M. King, Allison Hall, J. Geradts, Donald L Weaver, D. Mallo, Shannon T Holloway, Ethan Wu, Kevin A. Murgas, Robert B. West, Lars J. Grimm, Carlo C. Maley, Jeffrey R. Marks, Darryl Shibata, E. S. Hwang 2025-10-09 Cancer research 0 13
visibility_off Abstract PR006: Metabolic reprogramming of ovarian CD137+ TILs for treatment Paramita Chakraborty, Stephanie Mills, Jadan Zavestoski, Satyajit Das, S. Subramanian, Nicolina Mascia, Jian Liu, S. Berto, Brian Orr, Shikhar Mehrotra 2025-09-19 Cancer Research 0 3
visibility_off The distinct landscape of tumor immune microenvironment in homologous recombination deficient cancers Qiuyang Xu, Yuanjia Wen, Taiyuan Huang, Huayi Li, Xingzhe Liu, Shen-nan Shi, Wenjian Gong, Gordon B. Mills, Ding Ma, Qing-cui Gao, Yong Fang 2025-08-20 Biomarker Research 0 12
visibility_off Spatial profiling of longitudinal glioblastoma reveals consistent changes in cellular architecture, post-treatment. Shoaib Ajaib, Joshua Winter-Luke, Richard J Digby, Steven Pollock, Gemma Hemmings, A. Gusnanto, Aruna Chakrabarty, Azzam Ismail, Erica Wilson, B. Hunter, Andrew Filby, David McDonald, Asa A. Brockman, Rebecca A. Ihrie, Lucy F Stead 2025-09-01 Neuro-oncology 0 29
visibility_off Tertiary Lymphoid Structures in Human Melanoma: Molecular Mechanisms and Therapeutic Opportunities Gelare Ghajar-Rahimi, Ishika Patel, Nabiha Yusuf 2025-09-01 Cells 0 5
visibility_off P02.10.A CHARACTERIZATION OF THE TUMOR MICROENVIRONMENT IN PERIPHERAL AREAS OF GLIOBLASTOMA USING MULTIPLEX SEQUENTIAL PROTOCOLS. M. Ramírez González 2025-10-01 Neuro-Oncology 0 0
visibility_off From Discovery to Diagnosis: A Perspective for Circulating Tumor Cells in Personalized Oncology. C. Alix-Panabières, Klaus Pantel 2025-08-18 Cancer discovery 0 55
visibility_off Abstract A016: KRASG12D inhibition enhances tumor cell sensitivity to natural killer cell-mediated cytotoxicity Hongyuan Chen, Tuo Hu, Chao Xu, Liangjie Chi, Fangqin Xue, Chunbo He 2025-09-24 Cancer Immunology Research 0 1
visibility_off Abstract C109: Single-nucleus sequencing reveals a functionally distinct breast tumor microenvironment by ancestral group with implications for disease progression and therapy Alexandra R Harris, Huaitian Liu, Brittany D. Jenkins, Sanna Madan, Tiangen Chang, Tiffany H Dorsey, E. Ruppin, Shahin Sayed, Francis W. Makokha, Gretchen L. Gierach, S. Ambs 2025-09-18 Cancer Epidemiology, Biomarkers & Prevention 0 63
visibility_off P02.02.A IL6 UNDERLIES MICROENVIRONMENT IMMUNOSUPPRESSION AND RESISTANCE TO THERAPY IN GLIOBLASTOMA J. Young, N. Cho, C. G. Lucas, K. Seo, H. Najem, K. Mirchia, W. C. Chen, N. Zakimi, V. Daggubati, T. Casey-Clyde, M P Nguyen, A Chen, J. J. Phillips, T. Ozawa, M. Aghi, J. Taylor, J. DeRisi, A. Bhaduri, A. Heimberger, M. Berger, N. Butowski, M. H. Spitzer, D. Raleigh 2025-10-01 Neuro-Oncology 0 65
visibility_off Inflammation awakens dormant cancer cells by modulating the epithelial-mesenchymal phenotypic state. Jingwei Zhang, Jingwen Zhang, Longfei Han, Shiyi Wu, Jie Li, E. Eaton, Bingbing Yuan, Ferenc Reinhardt, Hao Li, Patrick C Strasser, Sunny Das, Joana Liu Donaher, Md Imtiaz Khalil, Haiping Jiang, Alexander Deuschel, Danni Lin, Carolin Sebastiany, Mariana Maranga, Salomé Shubitidze, Xiaofei Liu, Arthur W Lambert, Yun Zhang, Yana Liu, L. Sui, Sarah Elmiligy, Umberto Pozza, Rauf Günsay, Ranjan Mishra, José Velarde, Sonia Iyer, Whitney S. Henry, K. Weiskopf, Guihai Feng, Tobiloba E. Oni, R. Watnick, Xin Li, Robert A. Weinberg 2025-09-03 Proceedings of the National Academy of Sciences of the United States of America 0 45
visibility_off P08.13.A IDENTIFICATION OF VACCINE-INDUCED TCRS AGAINST GLIOBLASTOMA-ASSOCIATED ANTIGENS P. Koopmann, Y. Chih, A. Dietsch, K. Lindner, S. Stange, I. Poschke, T. Boschert, E. Green, L. Bunse, W. Wick, M. Platten 2025-10-01 Neuro-Oncology 0 24
visibility_off P08.21.A REINVIGORATING EXHAUSTED T CELLS IN GLIOBLASTOMA VIA PD1-IL2V IMMUNOCYTOKINE THERAPY U. Salazar, B. Taskoparan, L. Codarri Deak, V. Nicolini, C. Klein, H. Okada, J. vom Berg 2025-10-01 Neuro-Oncology 0 3
visibility_off Abstract A078: Tubal organoid biobanking and multi-omics framework uncovers rare basal peg cells as a source of epithelial stemness and a candidate for high-grade serous ovarian cancer origin Megan L. Ritting, Syed Mohammed Musheer Aalam, Mihai G. Dumbrava, W. Ismail, Alexandre Gaspar-Maia, Mark Sherman, Jamie N. Bakkum-Gamez, Nagarajan Kannan 2025-09-19 Cancer Research 0 8
visibility_off Single-cell sequencing technology in renal cancer: insights into tumor biology and clinical application Hanzhong Zhang, Ying Liu, Wenqiang Liu, Anqi Lin, Yu Fang, Le Qu, Xu Zhang, Peng Luo, Linhui Wang, Aimin Jiang 2025-10-01 Biomarker Research 0 6
visibility_off Spatial Distribution and Phenotypic Profiling of Cd68+ and Cd163+ Macrophages in Melanoma Progression: Insights into Tumor Microenvironment Dynamics G. Demyashkin, D. Atiakshin, K. Silakov, V. Shchekin, Maxim Bobrov, M. Vadyukhin, Tatyana Borovaya, Ekaterina Blinova, Petr Shegay, Andrei Kaprin 2025-09-01 Biomedicines 0 7
visibility_off Neuro-Cancer Interactions Shape Glioma Intratumoral Heterogeneity. Tong Wu, Peiran Zhao, Zheng Chen, Tianlei Ying, Zhihong Nie, Wei Hua, Huiyan Li, Ying Mao, Wenbo Bu 2025-08-21 Advanced science 0 18
visibility_off Phenotypic variations in glioma stem cells: regulatory mechanisms and implications for therapeutic strategies Guofeng Tian, Yifu Song, Yaochuan Zhang, Liang Kan, Ana Hou, Sheng Han 2025-09-02 Journal of Translational Medicine 0 7
visibility_off Preservation and Clonal Behavior of Extrachromosomal DNA in Patient-Derived Xenograft Models of Childhood Cancers. Rishaan Kenkre, Jon D. Larson, Owen S. Chapman, J. Luebeck, Yan Yuen Lo, Megan Paul, Wenshu Zhang, V. Bafna, Robert J Wechsler-Reya, Lukas Chavez 2025-08-19 bioRxiv : the preprint server for biology 0 74
visibility_off Abstract B125: Resolving PDAC cell subpopulations that seed metastatic recurrence Chongfeng Gao, Zachary L. Klamer, Ali Moursy, G. Hostetter, P. Grandgenett, Peter Allen, Brian Haab 2025-09-28 Cancer Research 0 41
visibility_off Machine Learning Extracts Radiation Resistant-Specific EdU Fluorescence Pattern in Cancer Cells. M. Ikura, Tsuyoshi Ikura, Kanji Furuya 2025-09-01 Genes to cells : devoted to molecular & cellular mechanisms 0 14
visibility_off OS05.5.A RADIAL GLIAL CELLS AS SOURCE ANTIGEN FOR ADOPTIVE CELLULAR THERAPY IN GLIOBLASTOMA C. Love, J. W. Figg, I. West, M. Englebart, A. Reid, D. Jin, D. Mitchell, C. Flores 2025-10-01 Neuro-Oncology 0 4
visibility_off From trash to treasure: tumor draining lymph nodes as a multi-omics goldmine in cancer therapy Yina Li, Zihan Chen, Zhikun Guo, Jiangnan Yu, Jianan Lu, Lei Wang, Qian Zhou 2025-08-19 Frontiers in Oncology 0 3
visibility_off Integrating bulk and single-cell sequencing reveals cellular heterogeneity between lung adenocarcinoma in smokers and never-smokers. Zihuan Zhao, Pan Yang, Yuhan Liu, Kai Wang, Xianfeng Xu, Yuzhuo Wang, Meng Zhu, N. Qin, Cheng Wang, Weimin Li, Hongxia Ma, Zhoufeng Wang, Hongbing Shen 2025-08-25 Journal of biomedical research 0 20
visibility_off Dynamic remodeling of tertiary lymphoid structures in response to cancer therapy: a recent review Chongyu Tan, Jinliang Huang, Ning Gao, Bingquan Wu, Matsika Juliet, Jiatong Xiao, Jiao Hu, Ping Liu, Jinbo Chen 2025-09-29 Cancer Immunology, Immunotherapy : CII 0 4
visibility_off [Progress of scRNA-seq technology in nasopharyngeal carcinoma research]. Bin Zheng, Guanqiao Jin 2025-09-01 Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery 0 0
visibility_off Abstract B119: LY6D identifies persistent tumor-initiating cells driving pancreatic tumorigenesis Juanjuan Shi, Yingying Tang, Zhengyan Zhang, Xian Wang, Shixin Meng, Ping Lu, Junyi Xu, Zheng Wang, Yongwei Sun, Jing Xue 2025-09-28 Cancer Research 0 7
visibility_off Pan-cancer analysis reveals molecular signatures for predicting matrix stiffness in solid tumors. Gongyu Tang, Xinyi Liu, Yuanxiang Li, Yunfei Ta, Minsu Cho, Hua Li, Xiaowei Wang 2025-09-24 International journal of cancer 0 5
visibility_off Abstract A014: Understanding the transcriptional heterogeneity of pediatric low-grade gliomas and its implication for tumor pathophysiology Michelle Boisvert, Ashwyn A. Perera, Alexandra L. Condurat, John Jeang, Jessica W Tsai, Dana Novikov, Kevin N Zhou, Madison S. Chacon, Jeromy J. Digiacomo, Rushil Kumbhani, Dayle K. Wang, Michael D. Taylor, J. Hansford, Louise E. Ludlow, Nada Jabado, Keith L. Ligon, R. Beroukhim, P. Bandopadhayay, David Jones 2025-09-25 Cancer Research 0 150
visibility_off Functional biomaterials and machine learning approaches for phenotyping heterogeneous tumor cells and extracellular vesicles. Rutwik Joshi, R. Ahmad, Karl Gardner, Hesaneh Ahmadi, Chau-Chyun Chen, Shannon L Stott, Wei Li 2025-09-18 Biomaterials science 0 15
visibility_off Polyclonal expansion of functional tumor-reactive lymphocytes infiltrating glioblastoma for personalized cell therapy M. Maffezzini, S. Musio, N. Di Ianni, Agnese Rumolo, M. Patanè, Andrea Galluzzo, Irene Sambruni, Arianna Berlendis, Domenico Aquino, Giacomo Baso, Manuela Zingarelli, M. Facciolla, L. Maddaloni, Rossella Valentino, R. Paterra, F. Agistri, M. Farinotti, Luca Mattei, Paola Coluccia, Francesco Acerbi, Francesco DiMeco, Bianca Pollo, Antonio Silvani, M. Eoli, Catia Traversari, Daniela Montagna, S. Pellegatta 2025-08-25 Nature Communications 0 38
visibility_off Perineural invasion and the “cold” tumor microenvironment in pancreatic cancer: mechanisms of crosstalk and therapeutic opportunities Jianbiao Xu, Hong Yao, Junfeng Wang, Yun Jin, Wei Chang, Lanjiang Li, Lei Zou 2025-08-20 Frontiers in Immunology 1 1
visibility_off Abstract B120: Mapping and modulating epithelial-mesenchymal plasticity under RAS(ON) multi-selective inhibition in PDAC through lineage tracing and Perturb-seq Julien Dilly, Mike Bogaev, Lynn Bi, Abigail Collins, Martin Jankowiak, Aziz Al’Khafaji, Kyle E Evans, M. Babadi, Thouis R. Jones, Elisa Donnard, David T Ting, N. Hacohen, D. Pe’er, Eric S. Lander, A. Aguirre, Arnav Mehta 2025-09-28 Cancer Research 0 114
visibility_off EP12.13 TARGETING THE INFILTRATIVE EDGE OF GLIOBLASTOMA: BIOMARKER INSIGHTS INTO EARLY TUMOR RECURRENCE M. Barak, M. Hendrych, J. Brychta, T. Kazda, P. Pospíšil, M. Hermanova, J. Šána, R. Jancalek 2025-10-01 Neuro-Oncology 0 22
visibility_off Targeting ORMDL2 in glioblastoma through integrated landscape of high-throughput sequencing and pharmacogenomic analysis Fitria Sari Wulandari, Chih-Yang Wang, Sachin Kumar, Ngoc Phung Ly, Juan Lorell Ngadio, Dahlak Daniel Solomon, Do Thi Minh Xuan, Gabriela Natasha Sutandi, Hung-Yun Lin, Hui-Ru Lin, Yung-Kuo Lee, Hao-Chien Yang, , Ching-Chung Ko 2025-09-27 International Journal of Medical Sciences 0 6
visibility_off Abstract A080: Deciphering the hierarchy of Notch signaling in the pancreatic tumor microenvironment Allison C Bischoff, Wei Yan, Carlos E Espinoza, Emily L. Lasse-Opsahl, Nur M Renollet, Yaqing Zhang, Marina Pasca di Magliano, Filip Bednar 2025-09-28 Cancer Research 0 39
visibility_off Preclinical Fluorescence-Guided Imaging Leveraging Surrounding Sentinel Tumor Microenvironment Identifies High-Risk Premalignant Pancreatic Lesions. Shilpa Sharma, Xiaoxia Wen, Jianbo Wang, Beibei Huang, Denise Hernandez, Cong-Dat Pham, Zhiwen Liu, S. J. Lin, Aiko Yamaguchi, Dimitra K. Georgiou, R. P. Coll, H. C. Manning 2025-08-25 Clinical cancer research : an official journal of the American Association for Cancer Research 0 5
visibility_off P01.31.A THE YAP/TAZ-TEAD AXIS PROMOTES TUMOR STEM CELL FUNCTIONALITY AND CELLULAR HETEROGENEITY IN PEDIATRIC HIGH-GRADE GLIOMAS R. Read, J. Luis Jimenez Macias, S. Oh, Z. Hu, K. Yin, N. Sele, N. Boon, A. Sing, S. Sloan 2025-10-01 Neuro-Oncology 0 0
visibility_off Patient-derived organoids reveal hypoxia-driven plasticity and therapeutic vulnerabilities in pheochromocytomas and paragangliomas. Xiaojing Wang, Maite Calucho, Cynthia M Estrada-Zuniga, Mehwish Noureen, Hector Gonzalez-Cantú, Samantha Mossuto, Jonathan N Levi, Bethany Landry, Qianjin Guo, Kailee A Rutherford, Zi-Ming Cheng, Andreanne Sannajust, Sapna Raghunathan, Sanskriti Balaji, Viviane Nascimento da Conceicao, Summer Norris, S. Y. Munawar, H. Nguyen, Jacob De Rosa, G. Tomlinson, James X Wu, Michael W. Yeh, M. Livhits, Anand Vaidya, James Powers, Ron Lechan, Art Tischler, Miao Zhang, Paul Graham, Camilo Jimenez, M. Peitzsch, Nicole Bechmann, Graeme Eisenhofer, Yanli Ding, Mio Kitano, A. Soragni, P. Dahia 2025-08-23 bioRxiv : the preprint server for biology 0 35
visibility_off Abstract A013: CRISPR-engineered human organoid-based pancreatic cancer model recapitulates early tumor features through TP53 inactivation Eden Demere Amare, Soraya SALAS-SILVA, Jihyun Shin, Dongho Choi 2025-09-28 Cancer Research 0 3
visibility_off Abstract B103: Defining cancer cell states that drive inflammation tolerance and KRAS inhibitor resistance in pancreatic cancer Yuzhou Evelyn Tong, Aswanth Mahalingam, Zixin Chen, Jacob Smigiel, Tsukasa Shibue, Andew Navia, Alex K. Shalek, Lorin Crawford, Ava P. Amini, Peter S. Winter, Srivatsan Raghavan 2025-09-28 Cancer Research 0 9
visibility_off Functional genetic screens reveal key pathways instructing the molecular phenotypes of tumor-associated macrophages. Youxue Lu, Ce Luo, Lanxiang Huang, Genyi Wu, Lihan Zhong, Jieyu Chu, Fubing Wang, Zexian Zeng, Deng Pan 2025-09-04 Cancer immunology research 0 11
visibility_off Immune Landscape of Intrahepatic Cholangiocarcinoma: Evasion and Therapeutic Insights Nunzia Porro, Elena Spínola-Lasso, F. Marra, A. Gentilini 2025-09-17 Immuno 0 23
visibility_off Abstract B098: RAS(ON) multi-selective inhibition remodels cancer-associated fibroblast subtypes and extracellular matrix in pancreatic cancer Allison C. Hess, Lorenzo Tomassoni, Kevin Muñoz Forti, Hun Jin Jeong, Deanna J. Besart, Tanner C. Dalton, Carmine F. Palermo, Stephen A. Sastra, Chang H. Lee, Andrea Califano, Simon Schwörer, K. Olive, Marie C. Hasselluhn 2025-09-28 Cancer Research 0 39
visibility_off Establishment of KGAS, a cell line derived from gastric-type adenocarcinoma of the uterine cervix Hiroaki Yamada, Akira Yokoi, Eri Asano-Inami, Masami Kitagawa, Kosuke Yoshida, Kazuhiro Suzuki, Shin Nishio, Hiroaki Kajiyama, Naotake Tsuda 2025-09-15 Human Cell 0 15
visibility_off Single-cell transcriptomic analysis reveals a metastasis-associated PCSK1+ neuroendocrine subpopulation in pancreatic neuroendocrine tumors. X. Yin, Xiaopeng Li, Lili Mi, Jiaojiao Hou, Fei Yin 2025-08-16 Journal of neuroendocrinology 0 8
visibility_off Immune Checkpoint Inhibition in Patients with Brain Metastases from Non-Small-Cell Lung Cancer: Emerging Mechanisms and Personalized Clinical Strategies Nicola J. Nasser, K. Sindhu, Loor Nasser, Z. Shafaee, Joshua Li, Lucas Resende Salgado, Baoqing Li 2025-09-01 International Journal of Molecular Sciences 0 6
visibility_off 32Interplay of Tumor-Intrinsic and microenvironmental gene expression predicts immune checkpoint blockade response in metastatic renal cell carcinoma Nicholas J. Salgia, Eric C. Kauffman, J. Muhitch 2025-10-01 The Oncologist 0 13
visibility_off Targeting Glioblastoma Cell State Plasticity for Enhanced Therapeutic Efficacy. S. Cirigliano, R. Singhania, James G Nicholson, Isha Monga, Yushan Wan, C. Haywood, Ashlesha Muley, Skylar A. Giacobetti, Howard A. Fine 2025-09-15 bioRxiv : the preprint server for biology 0 10
visibility_off Classifying Biophysical Subpopulations of Insulin Secretory Granules using Quantitative Whole Cell Structure Analysis Kevin Chang, Aneesh Deshmukh, Riva Verma, Valentina Loconte, Kate L. White 2025-09-15 bioRxiv 0 2
visibility_off Multiomic assessments of LNCaP and derived cell strains reveal determinants of prostate cancer pathobiology. Arnab Bose, Armand Bankhead Iii, Ilsa Coleman, Thomas Persse, Wanting Han, Patricia C. Galipeau, B. Hanratty, Tony L. Chu, Jared M. Lucas, Dapei Li, Rabeya Bilkis, P. Itagi, Sajida Hassan, Mallory Beightol, Minjeong Ko, R. Dumpit, Michael C. Haffner, C. Pritchard, G. Ha, Peter S Nelson 2025-09-16 The Journal of clinical investigation 0 22
visibility_off The Pdgfd-Pdgfrb axis orchestrates tumor-nerve crosstalk in pancreatic cancer. Peter L. Wang, N. Lester, Ella Perrault, J. Su, Dennis Gong, C. Shiau, Jingyi Cao, Phuong T T Nguyen, Jung Woo Bae, Deniz G Olgun, H. Hoffman, Ashley Lam, Jean Huang-Gao, Saifur Rahaman, Jimmy A. Guo, J. Barth, Nicholas J Caldwell, P. Divakar, Jason Reeves, Arya Bahrami, Shanshan He, Michael Patrick, Eric M. Miller, M. Ganci, Grissel Cervantes-Jaramillo, Theodore Hong, Jennifer Wo, Hannah Roberts, Ralph Weissleder, Hongyoon Choi, C. Fernández-del-Castillo, Kathy Cormier, David T Ting, Tyler Jacks, Lei Zheng, M. Hemberg, Mari Mino-Kenudson, William L Hwang 2025-08-31 bioRxiv : the preprint server for biology 0 14
visibility_off Abstract B104: Dissecting myeloid - cancer communication networks in pancreatic cancer Cavina K. Lee, Cecily Anaraki, Austin D. Silva, Tiffany Lai, Hillary Tran, Arjun Sapru 2025-09-28 Cancer Research 0 2
visibility_off Hypoxia-induced metastatic heterogeneity in pancreatic cancer Pradeep Moon Gunasekaran, Qianqian Wang, Yoke-Chen Chang, Polina Guseva, Rajika Chauhan, Alexander Kley, Gene Lee, Siddharth Ghosh Roy, Yousef Masoudpoor, Arthur Roberts, Kelly Watkins Walton, Lucyann Franciosa, Shafiq Bhat, Emmanuel Zachariah, Kishan Patel, Zhongren Zhou, Wenjin Chen, J. Ni, S. Gu, Cristina Montagna, Shin-Heng Chiou 2025-08-29 bioRxiv 0 20
visibility_off Bistability and Noise-Induced Evasion in Tumor-Immune Dynamics with Antigen Accumulation and Immune Escape Mengfan Tan, Shaoqing Chen, Chunjin Wei, Da Zhou 2025-09-14 ArXiv 0 2
visibility_off KS01.7.A IN VIVO CRISPR SCREENING UNCOVERS VULNERABILITIES FOR CANCER IMMUNOTHERAPY AGAINST GLIOBLASTOMA I. Sakic, E. Uijttewaal, A. Buck, B. Snijder, U. Elling, M. Weller, T. Weiss 2025-10-01 Neuro-Oncology 0 33
visibility_off Integrated single-cell and spatial transcriptomics uncover the prognostic, epigenetic, and immunological roles of FANCC in low-grade glioma. Zongye Zhang, Zhi Sha, Han Liu, Yusheng Chen, Zhendong Liu, Xingbo Cheng, Sujie Gu, Yanzheng Gao 2025-09-09 Neurological research 0 10
visibility_off Abstract IA009: Immune suppression in the fallopian tube: Insights from the pre-cancer atlas Tanjina Kader, Jia-Ren Lin, Clemens Hug, S. Coy, Yu-An Chen, Ino de. Bruijin, Clarence Yapp, J. Muhlich, N. Schultz, Charles W Drescher, P. Sorger, Ronny Drapkin, S. Santagata 2025-09-19 Cancer Research 0 32
visibility_off Characteristics of the tumor microenvironment and potential immunotherapy strategies in renal cell carcinoma Hui Wen, Shi Zheng, Xiaoqin Zhu, Ling Wang, Dongping Chen 2025-09-02 Frontiers in Immunology 0 1
visibility_off Fusion-driven oncogenic programs shape the immune landscape in translocation renal cell carcinoma. Prathyusha Konda, Cary N. Weiss, Yantong Cui, Sayed Matar, Jinyu Wang, Yasmin L Nabil, Riva Deodhar, Jiao Li, J. Horst, Sabrina Y. Camp, A. Sheshdeh, Jonathan L. Hecht, David J. Einstein, Yashika Rustagi, Anwesha Nag, A. Thorner, Cheng-Zhong Zhang, E. V. Van Allen, S. Signoretti, T. Choueiri, Srinivas R Viswanathan 2025-09-01 bioRxiv : the preprint server for biology 0 74
visibility_off Histologic Transformation in Cancer: The Path for Clinical Translation. Ioannis A. Vathiotis, Avisek Banerjee, Utsav Sen, Felix C Saalfeld, Debdatta Halder, A. Charpidou, Konstantin Syrigos, H. Horinouchi, Ashutosh K Tewari, Mark A Dawson, M. Wermke, Triparna Sen 2025-09-04 Cancer discovery 0 34
visibility_off Single-cell RNA profiling of colorectal granular-type laterally spreading tumor uncovers progression trajectory toward carcinoma and transcriptional signatures favoring lateral morphogenesis Yueqing Gong, Yuxin Zhang, Xun Liu, Rongli Cui, Jingjing Lu, Jun Li, Fang Gu, Jing Zhang, Shigang Ding, Weiwei Fu 2025-09-12 Frontiers in Oncology 0 4
visibility_off Abstract A084: Dynamics of tumor immune environment across organs in early and late-stage metastatic pancreatic cancer Yu-Lan Kao, Olivia M Dres, Blake Sells, Varun V Shenoy, Xiang Li, Kapur B. Dhami, P. Grandgenett, Li Ding, Liang-I Kang, D. DeNardo 2025-09-28 Cancer Research 0 54
visibility_off 41Single-cell dissection of immunosuppressive myeloid subclusters driving resistance to immune checkpoint therapy in renal cell carcinoma (RCC) S. Kashima, Rishabh Rout, M. Hugaboom, Zhaochen Ye, N. Schindler, A. Dighe, Maxine Sun, G. M. Lee, Wenxin Xu, S. Signoretti, Bradley A. McGregor, Rana McKay, Toni Choueri, D. Braun 2025-10-01 The Oncologist 0 76
visibility_off Abstract A012: Cancer acquires therapy resistance by converting immune infiltration to exclusion through NK cell-macrophage interactions Chia-Hsin Hsu, Andrew C White 2025-09-24 Cancer Immunology Research 0 1
visibility_off Spatially resolved analysis of TGF/BMP signalling in pancreatic ductal adenocarcinoma by digital pathology identifies patient subgroups with adverse outcome Konstantin Bräutigam, Philipp Zens, Stefan Reinhard, Jessica L. Rohrbach, Simon J Leedham, A. Wenning, B. Gloor, V. H. Koelzer, Martin Wartenberg 2025-08-18 BMC Cancer 0 10
visibility_off Abstract A023: Combating ovarian cancer resistance via polyploid cancer cell targeted screening Hsiao-Chun Chen, Yuan Zhang, Yushu Ma, Yu-Chih Chen 2025-09-19 Cancer Research 0 7
visibility_off Abstract PR003: Organoid models reveal distinct mechanisms of pre-tumor immune surveillance in high grade serous ovarian cancer Jianmei Hou, Benjamin G Neel 2025-09-19 Cancer Research 0 0
visibility_off Abstract A027: HuR drives immune evasion, metastases and KRAS addiction in pancreatic ductal adenocarcinoma: implications for IO-based and KRAS inhibitor therapies Miffy Guo, Jennifer M. Finan, Hen Halamish, Katherine R. Pelz, Robert Eil, Rosalie C. Sears, Jonathan R. Brody 2025-09-28 Cancer Research 0 8
visibility_off Integrative proteogenomic characterization of Wilms tumor Cheng Cheng, Li Zhang, Xiaofeng Chang, Kai Chen, Tian He, Jia Shi, Fan Lv, Lijia Pan, Yangkun Wu, Qianqian Cheng, Dong Ren, Y. Guo, Weiping Zhang, Huanmin Wang, Tieliu Shi, Jing Li, Xinxin Ni, Yeming Wu, Yaqiong Jin, Zhixiang Wu 2025-08-19 Nature Communications 0 18
visibility_off Tumor nutrient stress gives rise to a drug tolerant cell state in pancreatic cancer Colin Sheehan, Lyndon Hu, Guillaume Cognet, Grace Croley, Thao Trang Nguyen, Anika Thomas-Toth, Darby Agovino, Patrick B. Jonker, Mumina Sadullozoda, Leah M. Ziolkowski, James K. Martin, Alica K Beutel, Ranya Dano, Mohammed A. Khan, Christopher J Halbrook, Kay F. Macleod, Christopher R. Weber, James L LaBelle, Alexander Muir 2025-09-08 bioRxiv 0 11
visibility_off A fibroblast-centric network drives cold fibrosis in the tumor microenvironment of lung squamous cell carcinoma Shoval Miyara, Shachaf Frenkel, Avi Mayo, Philippe Gascard, Michael K. Strasser, David Gibbs, Eviatar Weizman, Itay Ben Shalom, Yan Stein, Deng Pan, Joseph A. Caruso, V. Sangwan, Nicholas Bertos, Julie Bérubé, Sophie Camilleri-Broet, Spyridon Oikonomopoulos, H. Djambazian, K. Umansky, Jacob Elkahal, Shimrit Mayer, Pierre Fiset, Jiannis Ragoussis, Miri Adler, Eldad Tzahor, Sui Huang, Lorenzo Ferri, T. Tlsty, Ruth Scherz-Shouval, U. Alon 2025-08-25 bioRxiv 0 60
visibility_off Circulating Tumor Cell‐Derived Organoids: Current Progress, Applications, and Future Tiantian Li, Biao Deng, Shenglong Li, Yanxia Wu, Zhenghao Lu, Zhu Liang 2025-09-01 MedComm – Future Medicine 0 1
visibility_off Decoding adenomyosis pathogenesis using an assembloid model. Yiliang Xu, Tao Cheng, Jianzhang Wang, Zhiruo Qiu, Xiaohong Guan, Yayuan Yu, Jiacheng Shen, Fangfang Xu, Xiaohong Jiang, Dandan Bai, Mingzhu Wang, Shuyan Mei, Hong Wang, Xiaocui Xu, Li Wu, Shaorong Gao, Xuan Che 2025-08-28 Science China. Life sciences 0 11
visibility_off STAT3 sustains tumorigenicity following mutant KRAS ablation. S. D'Amico, V. Kirillov, Jingxuan Liu, Zhijuan Qiu, Xinyuan Lei, Hong Qin, Brian S. Sheridan, Nancy C. Reich 2025-08-26 EMBO reports 0 6
visibility_off Abstract B040: Uncovering senescence-driven pathways in diffuse midline glioma progression and treatment resistance Timothy H. Chang, Alexander Nassar, Ria Kedia, Shriya Rangaswamy, Claudia L Kleinman, P. Bandopadhayay 2025-09-25 Cancer Research 0 41
visibility_off CTNNA3 and MBP Mediate Treatment Resistance Through Tumor Microenvironment Remodeling in Recurrent Glioblastoma Wenna Mao 2025-09-24 Theoretical and Natural Science 0 0
visibility_off Tumor-associated microbiota: Multi-cancer landscape, mechanistic insights and clinical translation (Review) Jindi Yang, Yige Dong, Yi Chen, Hong Liang, Shengyu Rong, Zhe Liu, Qiulei Lang 2025-09-16 Oncology Letters 0 1
visibility_off Lineage plasticity and histological transformation: tumor histology as a spectrum. Xiaoling Li, Eric E. Gardner, Sonia Molina-Pinelo, Clare Wilhelm, Ping Mu, Á. Quintanal-Villalonga 2025-09-30 Cell research 0 17
visibility_off P08.22.B SYSTEMATIC COMPARISON OF IMMUNOTHERAPIES IN GLIOBLASTOMA REVEALS DISTINCT IMMUNE RESPONSE PATTERNS Y. Liu, T. Look, J Fang, A. Dalmau Gasull, M. Prinz, T. Weiss, R. Sankowski 2025-10-01 Neuro-Oncology 0 3
visibility_off BARD1: A Friend or Foe in Pancreatic Ductal Adenocarcinoma? Lily Zekavat, Aditi Jain 2025-09-01 International Journal of Molecular Sciences 0 1
visibility_off Single-cell transcriptome analysis reveals regulatory programs associated with tumor resistance during immunotherapy in colorectal cancer. Yan Chen, Tao Liu, Guangtao Min, Cong Wang, Dali Xi, Lei Jiang 2025-09-10 International journal of surgery 0 1
visibility_off Mechanical confinement governs phenotypic plasticity in melanoma. Miranda V. Hunter, Eshita Joshi, Sydney Bowker, Emily D. Montal, Yilun Ma, Young Hun Kim, Zhifan Yang, Laura Tuffery, Zhuoning Li, Eric Rosiek, A. Browning, Reuben Moncada, Itai Yanai, Helen M Byrne, Mara Monetti, Elisa de Stanchina, Pierre-Jacques Hamard, R.P. Koche, Richard M. White 2025-08-27 Nature 0 16
visibility_off Impact of Mechanical and Architectural Signals in the Tumor Microenvironment on Melanoma. Z. M. Khan, Alejandro Rossello-Martinez, Michael Mak 2025-09-07 Advanced healthcare materials 0 5
visibility_off SURROGATE SELECTION OVERSAMPLES EXPANDED T CELL CLONOTYPES. Peng Yu, Yumin Lian, Elliot Xie, Cindy L. Zuleger, Richard J Albertini, Mark R Albertini, Michael A. Newton 2025-09-01 The annals of applied statistics 0 14
visibility_off P01.03.A SPATIOTEMPORAL ORGANIZATION OF BIOMOLECULES IN GLIOBLASTOMA MULTIFORME CELLS BY PHASE SEPARATION M. Sztacho, A. Chytła, C. Carrera Bravo, S. Abbasi Sani, E. Herencia Lagunar, R. Gönül 2025-10-01 Neuro-Oncology 0 1
visibility_off Abstract A047: Ras-dependent activation of BMAL2 regulates hypoxic metabolism in pancreatic cancer Á. C. García, Carlo Maurer, Sam Holmstrom, Cristina Castillo, Pasquale Laise, Carmine F. Palermo, Stephen A. Sastra, A. Andren, Li Zhang, Tessa Y. Le Large, Irina Sagalovsky, Daniel R. Ross, V. Rosario, K. Lu, Ethan Ferraiuolo, Nicholas Spinosa, W. Wong, K. Shaw, John A. Chabot, Jeanine Genkinger, H. Hibshoosh, G. Manji, Alina C Iuga, Roland M. Schmid Schmid, Michael A. Badgley, , Andrea Califano, Yatrik M. Shah, C. Lyssiotis, K. Olive 2025-09-28 Cancer Research 0 70
visibility_off MHCquant2 refines immunopeptidomics tumor antigen discovery Jonas Scheid, Steffen Lemke, Naomi Hoenisch-Gravel, Anna Dengler, Timo Sachsenberg, Arthur Declerq, R. Gabriels, J. Bauer, Marcel Wacker, Leon Bichmann, Lennart Martens, M. Dubbelaar, Sven Nahnsen, J. Walz 2025-09-22 Genome Biology 1 29
Abstract Title Authors Publication Date Journal/Conference Citation count Highest h-index