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Recommendations for the article Extrachromosomal DNA in Cancer.
| Abstract | Title | Authors | Publication Date | Journal/ Conference | Citation count | Highest h-index |
|---|---|---|---|---|---|---|
| visibility_off | Methods, bioinformatics tools and databases in ecDNA research: An overview | Xinyu Zhao, Huan Zhao, Yupeng Liu, Zhiyun Guo | 2023-11-01 | Computers in biology and medicine | 6 | 3 |
| visibility_off | Machine learning-based extrachromosomal DNA identification in large-scale cohorts reveals its clinical implications in cancer | Shixiang Wang, Chen-Yi Wu, M. He, Jia-Xin Yong, Yanxing Chen, Li-Mei Qian, Jin-Ling Zhang, Zhao-Lei Zeng, Rui-Hua Xu, Feng Wang, Qi Zhao | 2024-02-19 | Nature Communications | 8 | 26 |
| visibility_off | Reconstructing the three-dimensional architecture of extrachromosomal DNA with ec3D | Biswanath Chowdhury, Kaiyuan Zhu, Chaohui Li, J. Luebeck, Owen S. Chapman, Katerina Kraft, Shu Zhang, Lukas Chavez, A. Henssen, P. Mischel, Howard Y. Chang, V. Bafna | 2025-05-19 | bioRxiv | 0 | 72 |
| visibility_off | Characterization, biogenesis model, and current bioinformatics of human extrachromosomal circular DNA | Lina Zhou, Wenyi Tang, Bo Ye, Lingyun Zou | 2024-04-29 | Frontiers in Genetics | 1 | 1 |
| visibility_off | Bioinformatics advances in eccDNA identification and analysis. | Fuyu Li, Wenlong Ming, Wenxiang Lu, Ying Wang, Xianjun Dong, Yunfei Bai | 2024-08-29 | Oncogene | 4 | 29 |
| visibility_off | Circlehunter: a tool to identify extrachromosomal circular DNA from ATAC-Seq data | Manqiu Yang, Shufan Zhang, Rong Jiang, Shaomu Chen, Moli Huang | 2023-05-22 | Oncogenesis | 12 | 14 |
| visibility_off | CircleBase: an integrated resource and analysis platform for human eccDNAs | Xiaolu Zhao, Leisheng Shi, Shasha Ruan, W. Bi, Yifan Chen, Lin Chen, Yifan Liu, Mingkun Li, J. Qiao, Fengbiao Mao | 2021-11-18 | Nucleic Acids Research | 11 | 22 |
| visibility_off | AmpliconReconstructor: Integrated analysis of NGS and optical mapping resolves the complex structures of focal amplifications in cancer | J. Luebeck, C. Coruh, S. R. Dehkordi, Joshua T. Lange, Kristen M. Turner, Viraj Deshpande, Dave A. Pai, Chao Zhang, Utkrisht Rajkumar, Julie A. Law, P. Mischel, V. Bafna | 2020-01-23 | bioRxiv | 1 | 103 |
| visibility_off | EccBase: A high-quality database for exploration and characterization of extrachromosomal circular DNAs in cancer | Haiyang Sun, Xinyi Lu, Lingyun Zou | 2023-04-01 | Computational and Structural Biotechnology Journal | 12 | 9 |
| visibility_off | Abstract 3754: ecDNAInspector nominates high-confidence structural predictions of extrachromosomal DNA for downstream analysis | Sophia Pribus, Kathleen E. Houlahan, Lise Mangiante, Christina Curtis | 2025-04-21 | Cancer Research | 0 | 2 |
| Abstract | Title | Authors | Publication Date | Journal/Conference | Citation count | Highest h-index |