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Recommendations for the article Spatial epitope barcoding reveals subclonal tumor patch behaviors

Abstract Title Authors Publication Date Journal/ Conference Citation count Highest h-index
visibility_off SpaceBar enables clone tracing in spatial transcriptomic data Grant Kinsler, Caitlin Fagan, Haiyin Li, Jessica Kaster, Maggie Dunne, Robert J. Vander Velde, Ryan H. Boe, Sydney M. Shaffer, M. Herlyn, A. Raj, Yael Heyman 2025-02-14 bioRxiv 2 119
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visibility_off The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution. O. Rozenblatt-Rosen, A. Regev, Philipp Oberdoerffer, T. Nawy, A. Hupalowska, Jennifer E. Rood, O. Ashenberg, E. Cerami, R. Coffey, E. Demir, L. Ding, Edward D. Esplin, J. Ford, Jeremy Goecks, Sharmistha Ghosh, J. Gray, J. Guinney, Sean E Hanlon, Shannon K Hughes, E. Hwang, C. Iacobuzio-Donahue, Judit Jané-Valbuena, B. Johnson, K. Lau, T. Lively, S. Mazzilli, D. Pe’er, S. Santagata, A. Shalek, D. Schapiro, M. Snyder, P. Sorger, A. Spira, S. Srivastava, Kai Tan, Robert West, Elizabeth H. Williams, D. Aberle, S. Achilefu, F. Ademuyiwa, Andrew C. Adey, R. Aft, Rachana Agarwal, Ruben A. Aguilar, Fatemeh Alikarami, V. Allaj, Christopher L Amos, R. Anders, Michael Angelo, K. Anton, J. Aster, O. Babur, A. Bahmani, Akshay Balsubramani, D. Barrett, J. Beane, D. Bender, K. Bernt, L. Berry, C. Betts, Julie A. Bletz, Katie E. Blise, A. Boire, G. Boland, A. Borowsky, K. Bosse, M. Bott, E. Boyden, James B. Brooks, R. Bueno, Erik A. Burlingame, Q. Cai, Joshua D. Campbell, Wagma Caravan, H. Chaib, J. Chan, Y. Chang, D. Chatterjee, O. Chaudhary, Alyce A. Chen, Bob Chen, Changya Chen, Chia-hui Chen, F. Chen, Yu-An Chen, Milan G. Chheda, K. Chin, R. Chiu, Shih-Kai Chu, R. Chuaqui, Jaeyoung Chun, L. Cisneros, Graham A Colditz, K. Cole, Natalie B Collins, K. Contrepois, L. Coussens, A. Creason, D. Crichton, C. Curtis, Tanja Davidsen, S. Davies, I. Bruijn, L. Dellostritto, A. Marzo, D. DeNardo, D. Diep, S. Diskin, Xengie Doan, Julia L. Drewes, Stephen Dubinett, Michael Dyer, J. Egger, Jennifer Eng, Barbara Engelhardt, Graham S. Erwin, L. Esserman, Alex S. Felmeister, H. Feiler, R. Fields, S. Fisher, K. Flaherty, Jennifer Flournoy, A. Fortunato, A. Frangieh, Jennifer Frye, R. Fulton, Danielle Galipeau, Siting Gan, Jianjiong Gao, Long Gao, Peng Gao, Vianne R. Gao, Timothy A. Geiger, A. George, G. Getz, M. Giannakis, David L. Gibbs, W. Gillanders, S. Goedegebuure, A. Gould, K. Gowers, W. Greenleaf, Jeremy Gresham, J. Guerriero, Tuhin K. Guha, A. Guimaraes, D. Gutman, N. Hacohen, Sean E Hanlon, C. R. Hansen, O. Harismendy, Kathleen A Harris, A. Hata, Akimasa Hayashi, Cody N. Heiser, K. Helvie, J. Herndon, G. Hirst, F. Hodi, T. Hollmann, Aaron M. Horning, J. Hsieh, Shannon K Hughes, W. J. Huh, S. Hunger, Shelley E. Hwang, Heba Ijaz, B. Izar, C. Jacobson, S. Janes, R. Jayasinghe, Lihua Jiang, Brett E. Johnson, Bruce Johnson, T. Ju, H. Kadara, K. Kaestner, J. Kagan, L. Kalinke, R. Keith, Aziz Khan, W. Kibbe, A. Kim, Erika Kim, Junhyong Kim, A. Kolodzie, Mateusz Kopytra, E. Kotler, Robert Krueger, K. Krysan, Anshul B Kundaje, U. Ladabaum, B. Lake, Huy Lam, Rozelle Laquindanum, Ashley M. Laughney, Hayan Lee, M. Lenburg, Carin Leonard, I. Leshchiner, Rochelle Levy, Jerry Li, C. Lian, K. Lim, Jia-Ren Lin, Yiyun Lin, Qi Liu, Ruiyang Liu, William J. R. Longabaugh, T. Longacre, Cynthia X. Ma, M. C. Macedonia, T. Madison, C. Maher, A. Maitra, Netta Makinen, Danika Makowski, C. Maley, Z. Maliga, D. Mallo, J. Maris, Nicholas O. Markham, J. Marks, Daniel Martinez, R. J. Mashl, Ignas Masilionais, Jennifer L. Mason, J. Massagué, P. Massion, M. Mattar, R. Mazurchuk, L. Mazutis, Eliot T. McKinley, Joshua F. McMichael, Daniel Merrick, M. Meyerson, J. Miessner, G. Mills, M. Mills, Suman B Mondal, Motomi Mori, Y. Mori, Elizabeth Moses, Y. Mossé, J. Muhlich, G. Murphy, N. Navin, M. Nederlof, R. Ness, Stephanie A. Nevins, Milen Nikolov, A. J. Nirmal, G. Nolan, Edward Novikov, Brendan L O'Connell, M. Offin, S. Oh, Anastasiya Olson, A. Ooms, Miguel Ossandon, K. Owzar, Swapnil Parmar, Tasleema Patel, G. Patti, I. Pe’er, Tao Peng, Daniel Persson, Marvin Petty, Hanspeter Pfister, K. Polyak, K. Pourfarhangi, Sidharth V. Puram, Q. Qiu, Á. Quintanal-Villalonga, A. Raj, Marisol Ramirez-Solano, R. Rashid, Ashley N. Reeb, M. Reid, A. Resnick, Sheila M. Reynolds, J. Riesterer, S. Rodig, Joseph T. Roland, Sonia M. Rosenfield, Asaf Rotem, Sudipta Roy, C. Rudin, M. Ryser, Mariarita Santi-Vicini, Kazuhito Sato, D. Schrag, N. Schultz, C. Sears, R. Sears, S. Sen, T. Sen, A. Shalek, Jeff Sheng, Quanhu Sheng, K. Shoghi, M. Shrubsole, Y. Shyr, A. Sibley, Kiara Siex, A. Simmons, D. Singer, Shamilene Sivagnanam, M. Slyper, Artem Sokolov, Sheng-Kwei Song, Austin N. Southard-Smith, A. Spira, J. Stein, P. Storm, E. Stover, Siri H. Strand, Timothy Su, D. Sudar, Ryan Sullivan, Lea F. Surrey, M. Suvà, N. Terekhanova, Luke Ternes, Lisa Thammavong, Guillaume Thibault, G. Thomas, V. Thorsson, E. Todres, L. Tran, Madison A Tyler, Yasin Uzun, A. Vachani, E. Allen, S. Vandekar, D. Veis, S. Vigneau, A. Vossough, A. Waanders, N. Wagle, Liang-Bo Wang, M. Wendl, Robert West, Chi-Yun Wu, Hao Wu, Hung-Yi Wu, Matthew A. Wyczalkowski, Yubin Xie, Xiaolu Yang, C. Yapp, Wenbao Yu, Yinyin Yuan, Dadong Zhang, Kun Zhang, Mianlei Zhang, Nancy R. Zhang, Yantian Zhang, Yanyan Zhao, D. Zhou, Zilu Zhou, Houxiang Zhu, Qin Zhu, Xiangzhu Zhu, Yuankun Zhu, X. Zhuang 2020-04-16 Cell 446 227
visibility_off SpaceBar enables single-cell-resolution clone tracing with imaging-based spatial transcriptomics Grant Kinsler, Caitlin Fagan, Haiyin Li, Jessica Kaster, Maggie Dunne, Robert J. Vander Velde, Ryan H. Boe, Sydney M. Shaffer, M. Herlyn, Arjun Raj, Yael Heyman 2025-12-18 Nature Methods 2 119
visibility_off Spatially resolving cancer: from cell states to therapy. Guangsheng Pei, Yang Liu, Linghua Wang 2025-10-01 Trends in cancer 0 7
visibility_off Integrative spatial and genomic analysis of tumor heterogeneity with Tumoroscope S. Shafighi, Agnieszka Geras, Barbara Jurzysta, Alireza Sahaf Naeini, Igor Filipiuk, Alicja Rączkowska, Hosein Toosi, Łukasz Koperski, K. Thrane, Camilla Engblom, Jeff E. Mold, Xinsong Chen, Johan Hartman, D. Nowis, A. Carbone, Jens Lagergren, Ewa Szczurek 2024-10-29 Nature Communications 14 36
visibility_off Abstract 6302: A CellProfiler pipeline for RNAscope analyzing multiple markers across adjacent tissue sections spatially M. Shiao, N. Jinawath, Katherine Copeland, Ariestya Indah Permata Sari 2025-04-21 Cancer Research 0 22
visibility_off Spatial characterization of single tumor cells by proteomics 2022-05-19 Nature Biotechnology 2 0
Abstract Title Authors Publication Date Journal/Conference Citation count Highest h-index